RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 KCNIP2Q9NS61 270 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 TDRD6O60522 2096 aaKnown RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 C17orf51A8MQB3 221 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 H3BML4 177 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 PDE6DO43924 150 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR7C2O60412 319 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR7C1O76099 320 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 C1QTNF9P0C862 333 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 ARL16Q0P5N6 197 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 PRAMEF20Q5VT98 475 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 AMMECR1LQ6DCA0 310 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 NEGR1Q7Z3B1 354 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF439Q8NDP4 499 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR10V1Q8NGI7 309 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 TMEM234Q8WY98 164 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 MMABQ96EY8 250 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-213ENST00000523488 BORCS8Q96FH0 119 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR4C12Q96R67 309 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 OR6C1Q96RD1 312 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF835Q9Y2P0 537 aa7.1□□□□□ -1.27
CSMD1-213ENST00000523488 DNAJC13O75165 2243 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 A0A0J9YY10 115 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF891A8MT65 544 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 CDIPTO14735 213 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 TAX1BP3O14907 124 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 SPINK4O60575 86 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 NDUFB4O95168 129 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 COX5AP20674 150 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 OTX2P32243 289 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 THBS3P49746 956 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 PLCXD2Q0VAA5 305 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 MRPL49Q13405 166 aaKnown RBP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 TMEM108Q6UXF1 575 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 DEFB125Q8N687 156 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 OR1E3Q8WZA6 343 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 APOBEC3DQ96AK3 386 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 ODAMA1E959 279 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 M0R1X1 148 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 SYNGR2O43760 224 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 SS18L1O75177 396 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 DKK1O94907 266 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 IL11P20809 199 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 CLDN15P56746 228 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 SLC38A11Q08AI6 406 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 C19orf35Q6ZS72 473 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 SFTPA1Q8IWL2 248 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 TAF15Q92804 592 aaKnown RBP eCLIP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 TSACCQ96A04 125 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-213ENST00000523488 SFRP2Q96HF1 295 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 TTC28Q96AY4 2481 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 GPR179Q6PRD1 2367 aa7.09□□□□□ -1.27
CSMD1-213ENST00000523488 IGKV1-27A0A075B6S5 117 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 GAGE12BA1L429 117 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 B4DGG1 531 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 H0YIG0 161 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 SMPD2O60906 423 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 CLDN1O95832 211 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 TMPRSS3P57727 454 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 PMCHL1Q16048 86 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 FAM120AOSQ5T036 256 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 RAET1LQ5VY80 246 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 WDR74Q6RFH5 385 aaPredicted RBP7.09□□□□□ -1.28
CSMD1-213ENST00000523488 WFDC8Q8IUA0 241 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 RLN3Q8WXF3 142 aa7.09□□□□□ -1.28
CSMD1-213ENST00000523488 LRP5LA4QPB2 252 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 G3V3Y1 287 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 IGHG4P01861 327 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 DRD1P21728 446 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 CLDN17P56750 224 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 SMIM21Q3B7S5 101 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 KIAA1644Q3SXP7 199 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 Q56UQ5 140 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 OR8B3Q8NGG8 313 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 SPSB4Q96A44 273 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 KCNS1Q96KK3 526 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 OR8B2Q96RD0 313 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 OBP2AQ9NY56 170 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 UNC13CQ8NB66 2214 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 A0A1W2PPV4 95 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 A0A1W2PQU0 124 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 NHLH1Q02575 133 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 IZUMO4Q1ZYL8 232 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF718Q3SXZ3 478 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 OR10P1Q8NGE3 313 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 ALKBH4Q9NXW9 302 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 CACNG5Q9UF02 275 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 APC2O95996 2303 aa7.08□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM189A5PLL7 270 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 AHRRA9YTQ3 701 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 C3orf79P0CE67 100 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 PCSK4Q6UW60 755 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 SGCZQ96LD1 299 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM204Q9BSN7 226 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 SF3B5Q9BWJ5 86 aaKnown RBP7.07□□□□□ -1.28
CSMD1-213ENST00000523488 CCL28Q9NRJ3 127 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 IL36BQ9NZH7 164 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms