RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 CHRNA7P36544 502 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 MRPS15P82914 257 aaKnown RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 ZNF616Q08AN1 781 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 PLGLAQ15195 96 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 SRSF7Q16629 238 aaKnown RBP eCLIP9.59□□□□□ -0.877e-11■□□□□ 9.1
VEGFA-223ENST00000523125 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 Q6ZS49 121 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 PPP1R27Q86WC6 154 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 PDPNQ86YL7 162 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 OR10J5Q8NHC4 309 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 TSNAXQ99598 290 aaKnown RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 FAM103A1Q9BTL3 118 aaKnown RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 YTHDF1Q9BYJ9 559 aaKnown RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 ALX4Q9H161 411 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.879e-6■□□□□ 9.4
VEGFA-223ENST00000523125 SDHAF2Q9NX18 166 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 FOXA2Q9Y261 457 aaPredicted RBP9.59□□□□□ -0.87
VEGFA-223ENST00000523125 A3GALT2U3KPV4 340 aa9.59□□□□□ -0.87
VEGFA-223ENST00000523125 METTL21EPA6NDL7 271 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 NOTOA8MTQ0 251 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 ARPC1BO15143 372 aaKnown RBP9.58□□□□□ -0.88
VEGFA-223ENST00000523125 RAMP3O60896 148 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 SPDEFO95238 335 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 CA2P00918 260 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 CRYGBP07316 175 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 OR8U8P0C7N1 319 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 PSMB9P28065 219 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 RPS16P62249 146 aaKnown RBP9.58□□□□□ -0.88
VEGFA-223ENST00000523125 AKIRIN2Q53H80 203 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 TCTEX1D1Q8N7M0 179 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 LFNGQ8NES3 379 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 FCGR1BQ92637 280 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 FLYWCH2Q96CP2 140 aaKnown RBP9.58□□□□□ -0.88
VEGFA-223ENST00000523125 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 ATG5Q9H1Y0 275 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 SLC35D1Q9NTN3 355 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 STUB1Q9UNE7 303 aa9.58□□□□□ -0.88
VEGFA-223ENST00000523125 SLC25A17O43808 307 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 APOA2P02652 100 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 TMEM267Q0VDI3 215 aaPredicted RBP9.57□□□□□ -0.88
VEGFA-223ENST00000523125 PJVKQ0ZLH3 352 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 ARFRP1Q13795 201 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 CDNFQ49AH0 187 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 C11orf87Q6NUJ2 197 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 ZNF773Q6PK81 442 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 UNQ5815/PRO19632Q6UWF5 114 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 TPRA1Q86W33 373 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 H1FOOQ8IZA3 346 aaPredicted RBP9.57□□□□□ -0.88
VEGFA-223ENST00000523125 ABHD5Q8WTS1 349 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 DCUN1D4Q92564 292 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 OR51E2Q9H255 320 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 Q9H521 79 aa9.57□□□□□ -0.88
VEGFA-223ENST00000523125 ZMAT5Q9UDW3 170 aaKnown RBP9.57□□□□□ -0.88
VEGFA-223ENST00000523125 LSM4Q9Y4Z0 139 aaKnown RBP9.57□□□□□ -0.88
VEGFA-223ENST00000523125 SRRM4A7MD48 611 aaKnown RBP9.56□□□□□ -0.88
VEGFA-223ENST00000523125 LGALS1P09382 135 aaKnown RBP9.56□□□□□ -0.88
VEGFA-223ENST00000523125 DTYMKP23919 212 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 FXYD3Q14802 87 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 MRGPRG-AS1Q2M3A8 158 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 TMEM177Q53S58 311 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 HACD4Q5VWC8 232 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 DDB2Q92466 427 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 ARPC1AQ92747 370 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 DLX4Q92988 240 aaPredicted RBP9.56□□□□□ -0.88
VEGFA-223ENST00000523125 PRR25Q96S07 402 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 SSR3Q9UNL2 185 aa9.56□□□□□ -0.88
VEGFA-223ENST00000523125 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 A0A087WW49 117 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 LINC00473A8K010 186 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 SSX5O60225 188 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 CLEC2LP0C7M8 214 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 SDC2P34741 201 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 TALDO1P37837 337 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 ECI1P42126 302 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 LGALS7P47929 136 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 SLURP1P55000 103 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 CD69Q07108 199 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 ARL6IP1Q15041 203 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 VAX1Q5SQQ9 334 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 PYHIN1Q6K0P9 492 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 SFXN4Q6P4A7 337 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 BVESQ8NE79 360 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 LGALS14Q8TCE9 139 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 RHOVQ96L33 236 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 MS4A10Q96PG2 267 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 GINS4Q9BRT9 223 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 RNF167Q9H6Y7 350 aa9.55□□□□□ -0.88
VEGFA-223ENST00000523125 RRP15Q9Y3B9 282 aaKnown RBP9.55□□□□□ -0.88
VEGFA-223ENST00000523125 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
VEGFA-223ENST00000523125 LINC01619G3V211 115 aa9.54□□□□□ -0.88
VEGFA-223ENST00000523125 OVOL1O14753 267 aa9.54□□□□□ -0.88
VEGFA-223ENST00000523125 IGHV3-11P01762 117 aa9.54□□□□□ -0.88
VEGFA-223ENST00000523125 DUTP33316 252 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms