RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZNRD1Q9P1U0 126 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 SHPKQ9UHJ6 478 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 ARHGAP32A7KAX9 2087 aa10.62□□□□□ -0.71
CPNE3-205ENST00000522240 FLNAP21333 2647 aaKnown RBP10.61□□□□□ -0.71
CPNE3-205ENST00000522240 hCG_2014768A0A024R1R8 64 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 RNASEK-C17orf49H0YIS7 233 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 BUB1B-PAK6H3BSN5 160 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 M0R1X1 148 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 PROP1O75360 226 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 OR5AC1P0C628 307 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 TRAPPC2P0DI81 140 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 TRAPPC2BP0DI82 140 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 UCP1P25874 307 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 DUTP33316 252 aaKnown RBP10.61□□□□□ -0.71
CPNE3-205ENST00000522240 KIR2DS2P43631 304 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 THBS3P49746 956 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 UBE2E1P51965 193 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 DLX1P56177 255 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 RPL39P5Q59GN2 51 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 MINOS1Q5TGZ0 78 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 CADM3Q8N126 398 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 OR51H1Q8NH63 302 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 COQ8AQ8NI60 647 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 CHAC2Q8WUX2 184 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 TP53RKQ96S44 253 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 PHB2Q99623 299 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 TBL2Q9Y4P3 447 aaKnown RBP10.61□□□□□ -0.71
CPNE3-205ENST00000522240 AUP1Q9Y679 476 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 MINOS1-NBL1R4GNA1 71 aa10.61□□□□□ -0.71
CPNE3-205ENST00000522240 RBFOX2O43251 390 aaKnown RBP eCLIP10.6□□□□□ -0.71
CPNE3-205ENST00000522240 ARG1P05089 322 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 HTR1DP28221 377 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 CEACAM3P40198 252 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 BCAP31P51572 246 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 RRAS2P62070 204 aaPredicted RBP10.6□□□□□ -0.71
CPNE3-205ENST00000522240 ZNF816Q0VGE8 651 aaPredicted RBP10.6□□□□□ -0.71
CPNE3-205ENST00000522240 TMEM187Q14656 261 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 SLC9A3R2Q15599 337 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 CYB5R2Q6BCY4 276 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 C12orf45Q8N5I9 185 aaPredicted RBP10.6□□□□□ -0.71
CPNE3-205ENST00000522240 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 MAPK1IP1LQ8NDC0 245 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 CD300LFQ8TDQ1 290 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 CASTOR1Q8WTX7 329 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 IL22RA2Q969J5 263 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 TMEM222Q9H0R3 208 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 PRELID3BQ9Y3B1 194 aa10.6□□□□□ -0.71
CPNE3-205ENST00000522240 DUXBA0A1W2PPF3 345 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 LINC00473A8K010 186 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 OOSP1A8MZH6 123 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 LY6LH3BQJ8 138 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 SSNA1O43805 119 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 TGFAP01135 160 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 RPA2P15927 270 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 RPL30P62888 115 aaKnown RBP10.59□□□□□ -0.71
CPNE3-205ENST00000522240 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
CPNE3-205ENST00000522240 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 MIDNQ504T8 468 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 TPTE2P1Q5T6R2 138 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 C1orf229Q6ZS94 237 aaPredicted RBP10.59□□□□□ -0.71
CPNE3-205ENST00000522240 TGIF2LXQ8IUE1 241 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 LGI3Q8N145 548 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 GLYATL2Q8WU03 294 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 DDB2Q92466 427 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 LHX4Q969G2 390 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 TMEM56Q96MV1 263 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 GPHA2Q96T91 129 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 MRPL20Q9BYC9 149 aaKnown RBP10.59□□□□□ -0.71
CPNE3-205ENST00000522240 MED28Q9H204 178 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 DPM3Q9P2X0 92 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 TMEM56-RWDD3S4R434 201 aa10.59□□□□□ -0.71
CPNE3-205ENST00000522240 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
CPNE3-205ENST00000522240 DBX1A6NMT0 343 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 APOA2P02652 100 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 GAPDHP04406 335 aaKnown RBP10.58□□□□□ -0.72
CPNE3-205ENST00000522240 SERPINE2P07093 398 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 CD33P20138 364 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 OR8H3Q8N146 312 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 RPEQ96AT9 228 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 C7orf69Q9H7B7 122 aa10.58□□□□□ -0.72
CPNE3-205ENST00000522240 TRAV40A0A0B4J280 105 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 IGHV1-69DA0A0B4J2H0 117 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CENPVL3A0A0U1RRI6 287 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 HMX3A6NHT5 357 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 NPFFO15130 113 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CDS2O95674 445 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 IGHV1-69P01742 117 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 SULT1A3P0DMM9 295 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 SULT1A4P0DMN0 295 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CT45A6P0DMU7 189 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CT45A5P0DMU8 189 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CT45A7P0DMV0 189 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 RRASP10301 218 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CD99P14209 185 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 HLA-GP17693 338 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 EPHA1P21709 976 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 RAB13P51153 203 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms