RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 UMODP07911 640 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 TMEM116Q8NCL8 245 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 TNFRSF19Q9NS68 423 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 FAM57AQ8TBR7 257 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 A0A0B4J293 547 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 B9A039 149 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 KCNAB3O43448 404 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 EFNB2P52799 333 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 TMEM50BP56557 158 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 MMDQ15546 238 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 SPATA45Q537H7 98 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 KLF14Q8TD94 323 aaPredicted RBP13.93□□□□□ -0.18
USP42-207ENST00000521713 TMEM54Q969K7 222 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 PGLYRP3Q96LB9 341 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 SIRT4Q9Y6E7 314 aaPredicted RBP13.93□□□□□ -0.18
USP42-207ENST00000521713 C5orf52A6NGY3 159 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 DNASE2O00115 360 aaPredicted RBP13.92□□□□□ -0.18
USP42-207ENST00000521713 GNG7O60262 68 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 TCTAP57738 103 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 ZNF600Q6ZNG1 722 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 RHOVQ96L33 236 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 WFIKKN1Q96NZ8 548 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 AMELYQ99218 206 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 PIMREGQ9BSJ6 248 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 MEF2BQ02080 365 aaPredicted RBP13.92□□□□□ -0.18
USP42-207ENST00000521713 PSG5Q15238 335 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 WNT5BQ9H1J7 359 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 CD8AP01732 235 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 OR5R1Q8NH85 324 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 PERPQ96FX8 193 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 OR5AC2Q9NZP5 309 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 PIKFYVEQ9Y2I7 2098 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 TRAV39A0A0B4J263 110 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 MPDU1O75352 247 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 FABP2P12104 132 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 EGR4Q05215 589 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 MRPL54Q6P161 138 aaKnown RBP13.92□□□□□ -0.18
USP42-207ENST00000521713 SMIM12Q96EX1 92 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 GPR61Q9BZJ8 451 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 GSN-AS1Q9NRJ2 163 aa13.92□□□□□ -0.18
USP42-207ENST00000521713 ATP5J2P56134 94 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 TCL1AP56279 114 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 RPS4XP62701 263 aaKnown RBP13.91□□□□□ -0.18
USP42-207ENST00000521713 C1orf162Q8NEQ5 155 aaPredicted RBP13.91□□□□□ -0.18
USP42-207ENST00000521713 CKAP5Q14008 2032 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 A0A1B0GV90 55 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 TGFBR3LH3BV60 316 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 MC5RP33032 325 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 PLP1P60201 277 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 ZNF260Q3ZCT1 412 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 SPNS3Q6ZMD2 512 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 SAXO1Q8IYX7 474 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 ABHD14AQ9BUJ0 271 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 LINC00271P0C7V0 271 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 FAM157CP0CG43 387 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 ZNF708P17019 499 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 PSMB2P49721 201 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 OR4P4Q8NGL7 312 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 OR1L1Q8NH94 360 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 SLC25A33Q9BSK2 321 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 PATJQ8NI35 1801 aa13.91□□□□□ -0.18
USP42-207ENST00000521713 CACNA1GO43497 2377 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 GLRXP35754 106 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 MUC15Q8N387 334 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 TMEM252Q8N6L7 170 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 RSG1Q9BU20 258 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 HKR1P10072 659 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 PPP1CCP36873 323 aaKnown RBP13.9□□□□□ -0.18
USP42-207ENST00000521713 GLIPR1P48060 266 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 SBF1O95248 1867 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 CFHR1Q03591 330 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 C1orf100Q5SVJ3 147 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 RFLNBQ8N5W9 214 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 FAM206AQ9NX38 181 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 ZIC3O60481 467 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 MELTFP08582 738 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 FCGR3AP08637 254 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 NRN1LQ496H8 165 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 SPINK9Q5DT21 86 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 TMEM183AQ8IXX5 376 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 FADS6Q8N9I5 356 aa13.9□□□□□ -0.18
USP42-207ENST00000521713 OR2H2O95918 312 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 CA2P00918 260 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 CELA3AP09093 270 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 SCGB1D4Q6XE38 83 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 AICDAQ9GZX7 198 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 SCN5AQ14524 2016 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 DANCRP0C864 163 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 COL8A1P27658 744 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 PDLIM4P50479 330 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 FLVCR1-AS1Q8TAF5 88 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 SLC25A38Q96DW6 304 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 KCNK7Q9Y2U2 307 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 H2BFSP57053 126 aa13.89□□□□□ -0.19
USP42-207ENST00000521713 C17orf82Q86X59 251 aaPredicted RBP13.89□□□□□ -0.19
USP42-207ENST00000521713 C5orf17Q8NAS9 161 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms