RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 TIMM50Q3ZCQ8 353 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 FOXB2Q5VYV0 432 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 ZNF660Q6AZW8 331 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 PDPNQ86YL7 162 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 RAX2Q96IS3 184 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 DUX3Q96PT4 197 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 KLK15Q9H2R5 256 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 VCX3AQ9NNX9 186 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 FBXO7Q9Y3I1 522 aa13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 RBM7Q9Y580 266 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-211ENST00000521700 TRAV18A0A075B6X5 111 aa13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 IGLV1-40P01703 118 aa13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 EGR2P11161 476 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 GNG2P59768 71 aa13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 LSM3P62310 102 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 FLYWCH2Q96CP2 140 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 CLCC1Q96S66 551 aa13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 TSNAXQ99598 290 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 SLC35D1Q9NTN3 355 aa13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 NECAP2Q9NVZ3 263 aa13.96□□□□□ -0.17
TRAPPC9-211ENST00000521700 TRIM64CA6NLI5 447 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 CCL24O00175 119 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 TMEM127O75204 238 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 DUS4LO95620 317 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 CTXN2P0C2S0 81 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 RPS19P39019 145 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 CRIP2P52943 208 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 KIAA0141Q14154 515 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 DEFB136Q30KP8 78 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 C19orf54Q5BKX5 351 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 MYOZ3Q8TDC0 251 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 SPATA2Q9UM82 520 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 NUBP2Q9Y5Y2 271 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 TGP01266 2768 aa13.95□□□□□ -0.18
TRAPPC9-211ENST00000521700 J3QRK9 145 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 SPDEFO95238 335 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 NFYAP23511 347 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 CNIH2Q6PI25 160 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 TMEM65Q6PI78 240 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 ZNF562Q6V9R5 426 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 REC114Q7Z4M0 266 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 BVESQ8NE79 360 aa13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 AURKAIP1Q9NWT8 199 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-211ENST00000521700 A0A0A6YYH2 397 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 A6NJ64 397 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 SLC25A17O43808 307 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 SOX15O60248 233 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 CA2P00918 260 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 IGLV2-23P01705 113 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 DUTP33316 252 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 LGALS7P47929 136 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 RAB9AP51151 201 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 TAGLNQ01995 201 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 CROCCP3Q8IVE0 287 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 ZNF491Q8N8L2 437 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 C4orf3Q8WVX3 66 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 UBE2E2Q96LR5 201 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 FAM103A1Q9BTL3 118 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 AUNIPQ9H7T9 357 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 TPSG1Q9NRR2 321 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 ANXA10Q9UJ72 324 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 OR2W1Q9Y3N9 320 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 A3GALT2U3KPV4 340 aa13.93□□□□□ -0.18
TRAPPC9-211ENST00000521700 A0A1W2PN81 502 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 LINC00473A8K010 186 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 HLA-DQB1P01920 261 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 CRYGBP07316 175 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 CHRNA7P36544 502 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 LUMP51884 338 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 TMEM177Q53S58 311 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 PPP1R27Q86WC6 154 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 DDB2Q92466 427 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 GNB4Q9HAV0 340 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 DIABLOQ9NR28 239 aa13.92□□□□□ -0.18
TRAPPC9-211ENST00000521700 SRRM4A7MD48 611 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 KRTAP10-11P60412 298 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 TMEM267Q0VDI3 215 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 RTL8BQ17RB0 113 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 AKIRIN2Q53H80 203 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 HOGA1Q86XE5 327 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 GVQW1Q8N7I0 195 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 TCTEX1D1Q8N7M0 179 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 LFNGQ8NES3 379 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 BEST4Q8NFU0 473 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 ADTRPQ96IZ2 230 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 FUNDC2Q9BWH2 189 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 FOXA2Q9Y261 457 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 VSIG4Q9Y279 399 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 DNAH3Q8TD57 4116 aa13.91□□□□□ -0.18
TRAPPC9-211ENST00000521700 IGKV1D-13A0A0B4J2D9 117 aa13.9□□□□□ -0.18
TRAPPC9-211ENST00000521700 ARPC1BO15143 372 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-211ENST00000521700 SHOXO15266 292 aa13.9□□□□□ -0.18
TRAPPC9-211ENST00000521700 IGLV2-14P01704 120 aa13.9□□□□□ -0.18
TRAPPC9-211ENST00000521700 IGKV1-13P0DP09 117 aa13.9□□□□□ -0.18
TRAPPC9-211ENST00000521700 RRASP10301 218 aa13.9□□□□□ -0.18
TRAPPC9-211ENST00000521700 PTHLHP12272 177 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms