RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 C5orf30Q96GV9 206 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 ST6GALNAC5Q9BVH7 336 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 RBM38Q9H0Z9 239 aaKnown RBP7.47□□□□□ -1.21
CLK4-209ENST00000521621 OR2D2Q9H210 308 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 KIAA1456Q9P272 454 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 SIGLEC9Q9Y336 463 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 TSSC4Q9Y5U2 329 aaPredicted RBP7.47□□□□□ -1.21
CLK4-209ENST00000521621 CEPT1Q9Y6K0 416 aa7.47□□□□□ -1.21
CLK4-209ENST00000521621 BET1O15155 118 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 IGLV2-23P01705 113 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 IGHG4P01861 327 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 PTBP1P26599 531 aaKnown RBP eCLIP7.46□□□□□ -1.21
CLK4-209ENST00000521621 F2RL1P55085 397 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 UCP3P55916 312 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 CBX3Q13185 183 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 RTL8BQ17RB0 113 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 KLK9Q2XQG4 91 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 TEX45Q8NA69 505 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 MINDY2Q8NBR6 621 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 AIFM2Q9BRQ8 373 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 OR51J1Q9H342 316 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 KLK9Q9UKQ9 250 aa7.46□□□□□ -1.21
CLK4-209ENST00000521621 TET2Q6N021 2002 aaPredicted RBP7.46□□□□□ -1.22
CLK4-209ENST00000521621 H3BMQ9 156 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 H3BUA1 57 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 SPCS2Q15005 226 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 PSG5Q15238 335 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 FAM131AQ6UXB0 335 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 ZNF562Q6V9R5 426 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 CLVS1Q8IUQ0 354 aaPredicted RBP7.46□□□□□ -1.22
CLK4-209ENST00000521621 OR5AU1Q8NGC0 362 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 ISOC1Q96CN7 298 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 FLYWCH2Q96CP2 140 aaKnown RBP7.46□□□□□ -1.22
CLK4-209ENST00000521621 SOSTQ9BQB4 213 aa7.46□□□□□ -1.22
CLK4-209ENST00000521621 PSMB11A5LHX3 300 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 ZNF736B4DX44 427 aaPredicted RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 NOL3O60936 208 aaKnown RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 IGLV1-40P01703 118 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 OR8U9P0C7N5 309 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 PPIFP30405 207 aaKnown RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 UBE2KP61086 200 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 RUNX1Q01196 453 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 POU2AF1Q16633 256 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 LIN54Q6MZP7 749 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 TREML4Q6UXN2 200 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 BVESQ8NE79 360 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 OR4F17Q8NGA8 305 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 OR8U1Q8NH10 309 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 TAF15Q92804 592 aaKnown RBP eCLIP7.45□□□□□ -1.22
CLK4-209ENST00000521621 MOB3AQ96BX8 217 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 OR4F4Q96R69 305 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 NDUFA13Q9P0J0 144 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 IGHV7-81A0A0B4J1V7 117 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 M0R1X1 148 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 ARPC1BO15143 372 aaKnown RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 GSTZ1O43708 216 aaPredicted RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 CREBL2O60519 120 aaPredicted RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 HPGDSO60760 199 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 PPYP01298 95 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 CSF1P09603 554 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 MMDQ15546 238 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 TCTEX1D4Q5JR98 221 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 LPCAT3Q6P1A2 487 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 CENPVQ7Z7K6 275 aaPredicted RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 WFDC9Q8NEX5 89 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 OR4A5Q8NH83 315 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 DEDD2Q8WXF8 326 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 SLIRPQ9GZT3 109 aaKnown RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 MIXL1Q9H2W2 232 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 IFT46Q9NQC8 304 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 SLC35D1Q9NTN3 355 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 COMMD3Q9UBI1 195 aa7.45□□□□□ -1.22
CLK4-209ENST00000521621 MRPS7Q9Y2R9 242 aaKnown RBP7.45□□□□□ -1.22
CLK4-209ENST00000521621 IGHV3-72A0A0B4J1Y9 119 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 NCBP2LA6PVI3 153 aaKnown RBP7.44□□□□□ -1.22
CLK4-209ENST00000521621 CD74P04233 296 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 VSIG10L2P0DP72 767 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 CD28P10747 220 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 MAS1LP35410 378 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 AKIRIN2Q53H80 203 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 KPRPQ5T749 579 aaPredicted RBP7.44□□□□□ -1.22
CLK4-209ENST00000521621 PYHIN1Q6K0P9 492 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 TEX38Q6PEX7 206 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 LYSMD2Q8IV50 215 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 MTFP1Q9UDX5 166 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 PRELID3BQ9Y3B1 194 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 GABARAPH6UMI1 98 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 PEX14O75381 377 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 PSMB8P28062 276 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 CD300LFQ8TDQ1 290 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 MAFIPQ8WZ33 124 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 ZNF486Q96H40 463 aaPredicted RBP7.44□□□□□ -1.22
CLK4-209ENST00000521621 RITA1Q96K30 269 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 RSL24D1Q9UHA3 163 aaKnown RBP7.44□□□□□ -1.22
CLK4-209ENST00000521621 NUBP2Q9Y5Y2 271 aa7.44□□□□□ -1.22
CLK4-209ENST00000521621 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
CLK4-209ENST00000521621 ARSJQ5FYB0 599 aaPredicted RBP7.43□□□□□ -1.22
CLK4-209ENST00000521621 ARRDC1Q8N5I2 433 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 GVQW1Q8N7I0 195 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 TMEM229BQ8NBD8 167 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms