RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TRBV12-3P01733 135 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 MRPS15P82914 257 aaKnown RBP8.71□□□□□ -1.02
MRPS28-206ENST00000520946 RTL8BQ17RB0 113 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 OR10K2Q6IF99 312 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 ZNF383Q8NA42 475 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 HARBI1Q96MB7 349 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 DERL3Q96Q80 235 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 THAP7Q9BT49 309 aaPredicted RBP8.71□□□□□ -1.02
MRPS28-206ENST00000520946 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 PARP12Q9H0J9 701 aaKnown RBP8.71□□□□□ -1.02
MRPS28-206ENST00000520946 OR1A1Q9P1Q5 309 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 CLEC2DQ9UHP7 191 aa8.71□□□□□ -1.02
MRPS28-206ENST00000520946 DIMT1Q9UNQ2 313 aaKnown RBP8.71□□□□□ -1.02
MRPS28-206ENST00000520946 MYL12BO14950 172 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 LALBAP00709 142 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 CELP19835 753 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 MAP2K4P45985 399 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 RPS11P62280 158 aaKnown RBP eCLIP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 RPS27AP62979 156 aaKnown RBP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 HLA-DRB3P79483 266 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 RHOGP84095 191 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 PJVKQ0ZLH3 352 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 EXOSC2Q13868 293 aaKnown RBP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 TNXAQ16473 311 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 TTC23Q5W5X9 447 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 LINC00322Q6ZN03 302 aaPredicted RBP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 APH1BQ8WW43 257 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 ACOT12Q8WYK0 555 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 AGMATQ9BSE5 352 aa8.7□□□□□ -1.02
MRPS28-206ENST00000520946 URM1Q9BTM9 101 aaKnown RBP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 KLK5Q9Y337 293 aaPredicted RBP8.7□□□□□ -1.02
MRPS28-206ENST00000520946 FAM223BA6NKX1 122 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 NAPSAO96009 420 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 OR9G9P0C7N8 305 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
MRPS28-206ENST00000520946 HTR2CP28335 458 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 LINC00205P59089 165 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 TAGLNQ01995 201 aaKnown RBP8.69□□□□□ -1.02
MRPS28-206ENST00000520946 DEFB114Q30KQ6 69 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 ANKRD55Q3KP44 614 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 FAM209BQ5JX69 171 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 RBM48Q5RL73 367 aaKnown RBP8.69□□□□□ -1.02
MRPS28-206ENST00000520946 FAM223AQ8IWN6 122 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.69□□□□□ -1.02
MRPS28-206ENST00000520946 OR52B4Q8NGK2 314 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 GGHQ92820 318 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 CYYR1Q96J86 154 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 PGLYRP3Q96LB9 341 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 NICN1Q9BSH3 213 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 GGTLC1Q9BX51 225 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 RDH8Q9NYR8 311 aa8.69□□□□□ -1.02
MRPS28-206ENST00000520946 LOC102724200A0A096LPH7 203 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-206ENST00000520946 ZNF320A2RRD8 509 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 ZNF785A8K8V0 405 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 CREBL2O60519 120 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-206ENST00000520946 NDUFB8O95169 186 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 SCTP09683 121 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 RRASP10301 218 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 FOLR2P14207 255 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 KIR2DS2P43631 304 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 SERPINB10P48595 397 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 TPBGQ13641 420 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 PTX4Q96A99 478 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 WDR89Q96FK6 387 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-206ENST00000520946 CMSS1Q9BQ75 279 aaKnown RBP8.68□□□□□ -1.02
MRPS28-206ENST00000520946 DCUN1D5Q9BTE7 237 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 OR2D2Q9H210 308 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 C12orf4Q9NQ89 552 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 FAM53CQ9NYF3 392 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 AK3Q9UIJ7 227 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 DNAH7Q8WXX0 4024 aa8.68□□□□□ -1.02
MRPS28-206ENST00000520946 DPPA5A6NC42 116 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 BMPR1BO00238 502 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 BET1O15155 118 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 GGCTO75223 188 aaKnown RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 WBP4O75554 376 aaKnown RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 BPNT1O95861 308 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 PRH1P02810 166 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 MECP2P51608 486 aaKnown RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 ST3GAL4Q11206 333 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 ZNF57Q68EA5 555 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 ZNF880Q6PDB4 577 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 SLC25A42Q86VD7 318 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 ADAD2Q8NCV1 583 aaKnown RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 SETD9Q8NE22 299 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 OR10J5Q8NHC4 309 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 CYGBQ8WWM9 190 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 SRSF12Q8WXF0 261 aaKnown RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 SPIN2AQ99865 258 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 SPIN2BQ9BPZ2 258 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 HDHD3Q9BSH5 251 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 TM2D1Q9BX74 207 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 Q9N2K0 584 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 AKIP1Q9NQ31 210 aa8.67□□□□□ -1.02
MRPS28-206ENST00000520946 SMPD3Q9NY59 655 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-206ENST00000520946 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.66□□□□□ -1.02
MRPS28-206ENST00000520946 TRBV6-6A0A0A6YYG2 114 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms