RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 DUX4L9Q6RFH8 374 aaPredicted RBP9.49□□□□□ -0.89
CLK4-206ENST00000520878 OR4C12Q96R67 309 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 CALYQ9NYX4 217 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 KPTNQ9Y664 436 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 IGKV1D-17A0A075B6S4 117 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 NKX6-3A6NJ46 265 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 ADH4P08319 380 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 SPP1P10451 314 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 TIMP3P35625 211 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 RPL35P42766 123 aaKnown RBP9.49□□□□□ -0.89
CLK4-206ENST00000520878 MRPS11P82912 194 aaKnown RBP9.49□□□□□ -0.89
CLK4-206ENST00000520878 SRSF7Q16629 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLK4-206ENST00000520878 LINC01560Q8TB33 94 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 LHX4Q969G2 390 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 COL25A1Q9BXS0 654 aaPredicted RBP9.49□□□□□ -0.89
CLK4-206ENST00000520878 RAXQ9Y2V3 346 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 CACNA1AO00555 2505 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 IGKV1-39P01597 117 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 IGKV1D-39P04432 117 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 ARG1P05089 322 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 FGF7P21781 194 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 ZNF585BQ52M93 769 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 MBNL2Q5VZF2 373 aaKnown RBP9.49□□□□□ -0.89
CLK4-206ENST00000520878 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 TGIF2LYQ8IUE0 185 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 GINS3Q9BRX5 216 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 SEC11CQ9BY50 192 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 MMP24Q9Y5R2 645 aa9.49□□□□□ -0.89
CLK4-206ENST00000520878 IFNL4K9M1U5 179 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 ENSAO43768 121 aaKnown RBP9.48□□□□□ -0.89
CLK4-206ENST00000520878 IGLV1-44P01699 117 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 TUBG1P23258 451 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 CCL20P78556 96 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 TBR1Q16650 682 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 FAM122CQ6P4D5 195 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 IL22RA2Q969J5 263 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 HIPK2Q9H2X6 1198 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 TUBG2Q9NRH3 451 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 PLA2G2EQ9NZK7 142 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 ARFGEF3Q5TH69 2177 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 TRBV6-6A0A0A6YYG2 114 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 MARCH11A6NNE9 402 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 SRRM5B3KS81 715 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 C9JQL5 133 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 CLRN3Q8NCR9 226 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 SLC25A22Q9H936 323 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 MBNL3Q9NUK0 354 aaKnown RBP9.48□□□□□ -0.89
CLK4-206ENST00000520878 MALRD1Q5VYJ5 2156 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 PRB3Q04118 309 aaPredicted RBP9.48□□□□□ -0.89
CLK4-206ENST00000520878 PDLIM3Q53GG5 364 aaPredicted RBP9.48□□□□□ -0.89
CLK4-206ENST00000520878 BTNL8Q6UX41 500 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 LFNGQ8NES3 379 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
CLK4-206ENST00000520878 ZNF665Q9H7R5 613 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
CLK4-206ENST00000520878 RBFOX3A6NFN3 312 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 IGHV1-46P01743 117 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 OR8U8P0C7N1 319 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 SNCAP37840 140 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 LSM10Q969L4 123 aaKnown RBP9.47□□□□□ -0.89
CLK4-206ENST00000520878 SLC35B3Q9H1N7 401 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 RAB9BQ9NP90 201 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 LINC00473A8K010 186 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 CCL21O00585 134 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 HBE1P02100 147 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 CD200P41217 278 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 TAS2R30P59541 319 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 RPL31P62899 125 aaKnown RBP9.47□□□□□ -0.89
CLK4-206ENST00000520878 AWAT1Q58HT5 328 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 FAM90A1Q86YD7 464 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 ZBTB34Q8NCN2 500 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 AIFM2Q9BRQ8 373 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 GCM1Q9NP62 436 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 TRIM77I1YAP6 450 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 TAGLN2P37802 199 aaKnown RBP9.47□□□□□ -0.89
CLK4-206ENST00000520878 GUSBP1Q15486 140 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 ZNF880Q6PDB4 577 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 C1orf174Q8IYL3 243 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 LURAP1Q96LR2 239 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 SMCO4Q9NRQ5 59 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 RPRMQ9NS64 109 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 NDRG3Q9UGV2 375 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 LAMP3Q9UQV4 416 aa9.47□□□□□ -0.89
CLK4-206ENST00000520878 A0A1W2PPV4 95 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 C1orf87Q8N0U7 546 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 OR10X1Q8NGY0 326 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 NEUROG1Q92886 237 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 DPRXA6NFQ7 191 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 CST9LP1Q5W188 147 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 TRAT1Q6PIZ9 186 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 RHOVQ96L33 236 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 SLC25A10Q9UBX3 287 aaPredicted RBP9.46□□□□□ -0.89
CLK4-206ENST00000520878 PRELID1Q9Y255 219 aa9.46□□□□□ -0.89
CLK4-206ENST00000520878 DNASE2O00115 360 aaPredicted RBP9.46□□□□□ -0.9
CLK4-206ENST00000520878 ARL16Q0P5N6 197 aa9.46□□□□□ -0.9
CLK4-206ENST00000520878 MORN2Q502X0 79 aa9.46□□□□□ -0.9
CLK4-206ENST00000520878 NIPSNAP3BQ9BS92 247 aa9.46□□□□□ -0.9
CLK4-206ENST00000520878 QTRT1Q9BXR0 403 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms