RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 AUP1Q9Y679 476 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 hADV38S2A0JD32 116 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 KIAA1324LA8MWY0 1029 aaPredicted RBP11.89□□□□□ -0.51
CLN8-204ENST00000519254 ITGB1BP1O14713 200 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 SLC31A2O15432 143 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 MMP23AO75900 390 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 GPR12P47775 334 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 RPL31P62899 125 aaKnown RBP11.89□□□□□ -0.51
CLN8-204ENST00000519254 CATR1Q13166 79 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 OR2B11Q5JQS5 317 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 TCTEX1D2Q8WW35 142 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 BSCL2Q96G97 398 aaPredicted RBP11.89□□□□□ -0.51
CLN8-204ENST00000519254 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
CLN8-204ENST00000519254 MAGT1Q9H0U3 335 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 IFI27L2Q9H2X8 130 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 ZC4H2Q9NQZ6 224 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 IDI2-AS1Q9NZ38 188 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 LINC00312Q9Y6C7 94 aa11.89□□□□□ -0.51
CLN8-204ENST00000519254 LEUTXA8MZ59 168 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 TAAR5O14804 337 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 MEF2CQ06413 473 aaPredicted RBP11.88□□□□□ -0.51
CLN8-204ENST00000519254 ZNF273Q14593 569 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 CT45A1Q5HYN5 189 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 GPR157Q5UAW9 335 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 ZNF841Q6ZN19 808 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 CT45A3Q8NHU0 189 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 PATZ1Q9HBE1 687 aaKnown RBP11.88□□□□□ -0.51
CLN8-204ENST00000519254 FAM212BQ9NTI7 297 aaPredicted RBP11.88□□□□□ -0.51
CLN8-204ENST00000519254 TAS2R3Q9NYW6 316 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 CELSR2Q9HCU4 2923 aa11.88□□□□□ -0.51
CLN8-204ENST00000519254 GPR137BO60478 399 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 NXPH3O95157 252 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 P0C879 139 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 PAX1P15863 534 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 DUTP33316 252 aaKnown RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 AKR1C2P52895 323 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 GNB2P62879 340 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 CLEC9AQ6UXN8 241 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 C1orf229Q6ZS94 237 aaPredicted RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 ZNF439Q8NDP4 499 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 C10orf105Q8TEF2 133 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 CACNG5Q9UF02 275 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 FBXL17Q9UF56 701 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 A0A1W2PPE3 182 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 SSSCA1O60232 199 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 TMEM50AO95807 157 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 TPT1P13693 172 aaKnown RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 NFYBP25208 207 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 ZNF816Q0VGE8 651 aaPredicted RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 DEFB113Q30KQ7 82 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 RPL39P5Q59GN2 51 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 PRAMEF5Q5TYX0 476 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 WDR25Q64LD2 544 aaPredicted RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 TMEM200BQ69YZ2 307 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 ABHD14AQ9BUJ0 271 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
CLN8-204ENST00000519254 GAB2Q9UQC2 676 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 MMP24Q9Y5R2 645 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 SPG11Q96JI7 2443 aa11.87□□□□□ -0.51
CLN8-204ENST00000519254 TACC2O95359 2948 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 CHST1O43916 411 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 S1PR2O95136 353 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 MMP9P14780 707 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 RAB7AP51149 207 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 ERVFRD-1P60508 538 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 NHLH2Q02577 135 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 TMEM30BQ3MIR4 351 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 ODF3L1Q8IXM7 274 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 SSBP3Q9BWW4 388 aaPredicted RBP11.86□□□□□ -0.51
CLN8-204ENST00000519254 SLC25A32Q9H2D1 315 aa11.86□□□□□ -0.51
CLN8-204ENST00000519254 ANKRD34BA5PLL1 514 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 FAM24AA6NFZ4 105 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 M0R1X1 148 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 NDUFS8O00217 210 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 KRASP01116 189 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 IGHV2-5P01817 119 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 CCL3L1P16619 93 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
CLN8-204ENST00000519254 G6PCP35575 357 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 PAX9P55771 341 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 CLEC12BQ2HXU8 276 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 OR2C3Q8N628 320 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 CXorf58Q96LI9 332 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 SMIM3Q9BZL3 60 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
CLN8-204ENST00000519254 IGSF23A1L1A6 192 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 GAPDHP04406 335 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms