RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 DEPPQ9NTK1 212 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 NBEAQ8NFP9 2946 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 ODAMA1E959 279 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 NPIPB11E5RHQ5 1161 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 MBP02144 154 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 P04436 131 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 OR3A1P47881 315 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 ZXDAP98168 799 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 APOBEC3DQ96AK3 386 aaPredicted RBP10.4□□□□□ -0.74
PCM1-203ENST00000517545 C5orf30Q96GV9 206 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 PCED1AQ9H1Q7 454 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 TP53TG3Q9ULZ0 132 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 TTC28Q96AY4 2481 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 CACNA1DQ01668 2161 aa10.4□□□□□ -0.74
PCM1-203ENST00000517545 LRP5LA4QPB2 252 aa10.4□□□□□ -0.75
PCM1-203ENST00000517545 PINLYPA6NC86 204 aa10.4□□□□□ -0.75
PCM1-203ENST00000517545 DLEU1O43261 78 aa10.4□□□□□ -0.75
PCM1-203ENST00000517545 CA6P23280 308 aa10.4□□□□□ -0.75
PCM1-203ENST00000517545 OR10P1Q8NGE3 313 aa10.4□□□□□ -0.75
PCM1-203ENST00000517545 ELOVL5Q9NYP7 299 aa10.4□□□□□ -0.75
PCM1-203ENST00000517545 TRBV20OR9-2A0A075B6H5 130 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 SRFP11831 508 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 CDC34P49427 236 aaPredicted RBP10.39□□□□□ -0.75
PCM1-203ENST00000517545 LINC00310P59036 64 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 SPATA46Q5T0L3 261 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 NUFIP2Q7Z417 695 aaKnown RBP10.39□□□□□ -0.75
PCM1-203ENST00000517545 LINC00596Q86U02 117 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 CMTM2Q8TAZ6 248 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
PCM1-203ENST00000517545 S1PR2O95136 353 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 OR2H2O95918 312 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 CDKN1AP38936 164 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 SOX8P57073 446 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 LINC00205P59089 165 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 ZNF709Q8N972 641 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 PARD6AQ9NPB6 346 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 LRRC30A6NM36 301 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 YPEL1O60688 119 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 RPLP1P05386 114 aaKnown RBP10.39□□□□□ -0.75
PCM1-203ENST00000517545 CCL4P13236 92 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 COL8A2P25067 703 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 GNG3P63215 75 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 GTF3C1Q12789 2109 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 ZNF573Q86YE8 665 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 DTD1Q8TEA8 209 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 YPEL2Q96QA6 119 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 PAM16Q9Y3D7 125 aa10.39□□□□□ -0.75
PCM1-203ENST00000517545 SS18L1O75177 396 aaPredicted RBP10.38□□□□□ -0.75
PCM1-203ENST00000517545 CBLN1P23435 193 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 GDF1P27539 372 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 THBS3P49746 956 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 BATFQ16520 125 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 C21orf62-AS1Q17RA5 79 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 ZNF497Q6ZNH5 498 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 TUSC5Q8IXB3 177 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 Q8N7P7 452 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 SFRP2Q96HF1 295 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 DIRC2Q96SL1 478 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 CDX2Q99626 313 aaPredicted RBP10.38□□□□□ -0.75
PCM1-203ENST00000517545 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 SELEP16581 610 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 CD82P27701 267 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 BRWD1-AS2P59051 145 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 ATP6V1FQ16864 119 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 TPTE2P1Q5T6R2 138 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 POM121L2Q96KW2 1035 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
PCM1-203ENST00000517545 SYNGR4O95473 234 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 SFTPCP11686 197 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 PI4KAP42356 2102 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 EDDM3BP56851 147 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 OR2D2Q9H210 308 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 ZDHHC11Q9H8X9 412 aa10.38□□□□□ -0.75
PCM1-203ENST00000517545 C17orf98A8MV24 154 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 F2Z2F3 143 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 TMPRSS2O15393 492 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 RBMXL2O75526 392 aaKnown RBP10.37□□□□□ -0.75
PCM1-203ENST00000517545 P0C879 139 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
PCM1-203ENST00000517545 HOXA4Q00056 320 aaPredicted RBP10.37□□□□□ -0.75
PCM1-203ENST00000517545 RELQ04864 619 aaPredicted RBP10.37□□□□□ -0.75
PCM1-203ENST00000517545 FOXL1Q12952 345 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 ZDBF2Q9HCK1 2354 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 WDFY4Q6ZS81 3184 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 EPHA8P29322 1005 aaPredicted RBP10.37□□□□□ -0.75
PCM1-203ENST00000517545 Q0VFX4 171 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 VASH2Q86V25 355 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 HSPB9Q9BQS6 159 aa10.37□□□□□ -0.75
PCM1-203ENST00000517545 TNRC6BQ9UPQ9 1833 aaKnown RBP10.36□□□□□ -0.75
PCM1-203ENST00000517545 SERF1AO75920 110 aa10.36□□□□□ -0.75
PCM1-203ENST00000517545 CD99P14209 185 aa10.36□□□□□ -0.75
PCM1-203ENST00000517545 LHX2P50458 406 aa10.36□□□□□ -0.75
PCM1-203ENST00000517545 TNFSF10P50591 281 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms