RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CNIH2Q6PI25 160 aa19.26■□□□□ 0.67
PVT1-204ENST00000517525 C8orf86Q6ZUL3 223 aa19.26■□□□□ 0.67
PVT1-204ENST00000517525 KLHL30-AS1Q8NEE0 82 aa19.26■□□□□ 0.67
PVT1-204ENST00000517525 FLYWCH2Q96CP2 140 aaKnown RBP19.26■□□□□ 0.67
PVT1-204ENST00000517525 FBXL15Q9H469 300 aa19.26■□□□□ 0.67
PVT1-204ENST00000517525 TRAV41A0A0B4J266 112 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 NUDT19A8MXV4 375 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 LGALS7P47929 136 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 LINC00205P59089 165 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 GNG2P59768 71 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 ZNF562Q6V9R5 426 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 TCTEX1D1Q8N7M0 179 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 NUDCD2Q8WVJ2 157 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 C5orf30Q96GV9 206 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 ST6GALNAC5Q9BVH7 336 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 NECAP2Q9NVZ3 263 aa19.25■□□□□ 0.67
PVT1-204ENST00000517525 PRKDCP78527 4128 aaKnown RBP19.25■□□□□ 0.67
PVT1-204ENST00000517525 IGLL1P15814 213 aa19.24■□□□□ 0.67
PVT1-204ENST00000517525 NDPQ00604 133 aa19.24■□□□□ 0.67
PVT1-204ENST00000517525 KIAA0141Q14154 515 aaPredicted RBP19.24■□□□□ 0.67
PVT1-204ENST00000517525 ADTRPQ96IZ2 230 aa19.24■□□□□ 0.67
PVT1-204ENST00000517525 PARP11Q9NR21 331 aa19.24■□□□□ 0.67
PVT1-204ENST00000517525 SLC35D1Q9NTN3 355 aa19.24■□□□□ 0.67
PVT1-204ENST00000517525 NUBP2Q9Y5Y2 271 aa19.24■□□□□ 0.67
PVT1-204ENST00000517525 G3V318 75 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 FCN1O00602 326 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 HLA-DQB1P01920 261 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 RRASP10301 218 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 RPS19P39019 145 aaKnown RBP19.23■□□□□ 0.67
PVT1-204ENST00000517525 RPS16P62249 146 aaKnown RBP19.23■□□□□ 0.67
PVT1-204ENST00000517525 C4orf3Q8WVX3 66 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 UBE2E2Q96LR5 201 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 GPR61Q9BZJ8 451 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 DIABLOQ9NR28 239 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 METTL1Q9UBP6 276 aaKnown RBP19.23■□□□□ 0.67
PVT1-204ENST00000517525 ANXA10Q9UJ72 324 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 OR2W1Q9Y3N9 320 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 WSB1Q9Y6I7 421 aa19.23■□□□□ 0.67
PVT1-204ENST00000517525 TRAV18A0A075B6X5 111 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 SLC22A5O76082 557 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 EGR2P11161 476 aaPredicted RBP19.22■□□□□ 0.67
PVT1-204ENST00000517525 PLGLAQ15195 96 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 TMEM177Q53S58 311 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 DDB2Q92466 427 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 RAX2Q96IS3 184 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 MCRIP2Q9BUT9 160 aaKnown RBP19.22■□□□□ 0.67
PVT1-204ENST00000517525 AUNIPQ9H7T9 357 aa19.22■□□□□ 0.67
PVT1-204ENST00000517525 CCL24O00175 119 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 IGLV2-23P01705 113 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 CRYGBP07316 175 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 DUTP33316 252 aaKnown RBP19.21■□□□□ 0.67
PVT1-204ENST00000517525 RUNX1Q01196 453 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 TMEM267Q0VDI3 215 aaPredicted RBP19.21■□□□□ 0.67
PVT1-204ENST00000517525 AKIRIN2Q53H80 203 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 FOXB2Q5VYV0 432 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 LCNL1Q6ZST4 164 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 FBXO7Q9Y3I1 522 aa19.21■□□□□ 0.67
PVT1-204ENST00000517525 RBM7Q9Y580 266 aaKnown RBP19.21■□□□□ 0.67
PVT1-204ENST00000517525 TUSC2O75896 110 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 TGFBR1P36897 503 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 LUMP51884 338 aaPredicted RBP19.2■□□□□ 0.66
PVT1-204ENST00000517525 TMEM65Q6PI78 240 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 HOGA1Q86XE5 327 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 ZNF491Q8N8L2 437 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 KCTD12Q96CX2 325 aaKnown RBP19.2■□□□□ 0.66
PVT1-204ENST00000517525 KLK15Q9H2R5 256 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 DNAH3Q8TD57 4116 aa19.2■□□□□ 0.66
PVT1-204ENST00000517525 XRCC3O43542 346 aa19.19■□□□□ 0.66
PVT1-204ENST00000517525 RAB9AP51151 201 aa19.19■□□□□ 0.66
PVT1-204ENST00000517525 FHL3Q13643 280 aa19.19■□□□□ 0.66
PVT1-204ENST00000517525 RTL8BQ17RB0 113 aa19.19■□□□□ 0.66
PVT1-204ENST00000517525 ZNF645Q8N7E2 425 aa19.19■□□□□ 0.66
PVT1-204ENST00000517525 OR13F1Q8NGS4 319 aa19.19■□□□□ 0.66
PVT1-204ENST00000517525 FOXA2Q9Y261 457 aaPredicted RBP19.19■□□□□ 0.66
PVT1-204ENST00000517525 CBX5P45973 191 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 EGFEM1PQ0D2K5 195 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 CBX3Q13185 183 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 PPP1R27Q86WC6 154 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 BVESQ8NE79 360 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 SLC25A46Q96AG3 418 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 S100A16Q96FQ6 103 aaKnown RBP19.18■□□□□ 0.66
PVT1-204ENST00000517525 FUNDC2Q9BWH2 189 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 VSIG4Q9Y279 399 aa19.18■□□□□ 0.66
PVT1-204ENST00000517525 SLC25A17O43808 307 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 SOX15O60248 233 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 CA2P00918 260 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 NFYAP23511 347 aaPredicted RBP19.17■□□□□ 0.66
PVT1-204ENST00000517525 MSMO1Q15800 293 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 UBE2NLQ5JXB2 153 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 PYHIN1Q6K0P9 492 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 BEST4Q8NFU0 473 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 OR5M8Q8NGP6 311 aa19.17■□□□□ 0.66
PVT1-204ENST00000517525 LINC00473A8K010 186 aa19.16■□□□□ 0.66
PVT1-204ENST00000517525 I3L521 148 aa19.16■□□□□ 0.66
PVT1-204ENST00000517525 IGLV2-14P01704 120 aa19.16■□□□□ 0.66
PVT1-204ENST00000517525 LSM3P62310 102 aaKnown RBP19.16■□□□□ 0.66
PVT1-204ENST00000517525 OSR1Q8TAX0 266 aaPredicted RBP19.16■□□□□ 0.66
PVT1-204ENST00000517525 HARBI1Q96MB7 349 aa19.16■□□□□ 0.66
PVT1-204ENST00000517525 CMTM3Q96MX0 182 aa19.16■□□□□ 0.66
PVT1-204ENST00000517525 AURKAIP1Q9NWT8 199 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms