RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 NUP210Q8TEM1 1887 aaPredicted RBP9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 GALNT14Q96FL9 552 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR2V2Q96R30 315 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 WIPI2Q9Y4P8 454 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 INSIG2Q9Y5U4 225 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 TRGC1P0CF51 173 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 MMP9P14780 707 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 GNG4P50150 75 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 LYZP61626 148 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 ATP6V1FQ16864 119 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 RIPPLY2Q5TAB7 128 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 RSG1Q9BU20 258 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 TNFRSF19Q9NS68 423 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 PITPNC1Q9UKF7 332 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 GFRA3O60609 400 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR2H2O95918 312 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 PGA5P0DJD9 388 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 BCL2P10415 239 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 PMCHP20382 165 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 CAMPP49913 170 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 UBE2L3P68036 154 aaKnown RBP9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 PMS2P11Q13670 270 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 Q8WTZ3 238 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 LYZL4Q96KX0 146 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 NAT8Q9UHE5 227 aa9.27□□□□□ -0.92
PCDHGA1-202ENST00000517417 SHANK1Q9Y566 2161 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 IGHV3-21A0A0B4J1V1 117 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 A0A1B0GV90 55 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 KIAA1324LA8MWY0 1029 aaPredicted RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 S100A4P26447 101 aaKnown RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 FCER1GP30273 86 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 VSTM2AQ8TAG5 236 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 FAM131CQ96AQ9 280 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 VAX2Q9UIW0 290 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 CHCHD2Q9Y6H1 151 aaPredicted RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 SRP19P09132 144 aaKnown RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 DDTP30046 118 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 CEACAM3P40198 252 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 GLIPR1P48060 266 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 TCL1AP56279 114 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 PSG5Q15238 335 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 SSX7Q7RTT5 188 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 SELENOHQ8IZQ5 122 aaKnown RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR1B1Q8NGR6 318 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 SIGLEC12Q96PQ1 595 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 A0A1B0GU03 582 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 HBZP02008 142 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 P2RY6Q15077 328 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 IZUMO4Q1ZYL8 232 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 MYPOPQ86VE0 399 aaPredicted RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR4F17Q8NGA8 305 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 FLYWCH2Q96CP2 140 aaKnown RBP9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 WNT5BQ9H1J7 359 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 ARL2-SNX15V9GYD0 113 aa9.27□□□□□ -0.93
PCDHGA1-202ENST00000517417 C11orf94C9JXX5 98 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 CDX4O14627 284 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 PAGE4O60829 102 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 CYB5R3P00387 301 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 CCL1P22362 96 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 HIST1H3AP68431 136 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 CCL20P78556 96 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 DPPA3Q6W0C5 159 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 H1FOOQ8IZA3 346 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 ITLN1Q8WWA0 313 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 LOC102723971A0A1B0GUV8 181 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 TMEM210A6NLX4 147 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 K7ESF4 209 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 FCN1O00602 326 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 KIR2DS2P43631 304 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 HEPN1Q6WQI6 88 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 ZNF441Q8N8Z8 693 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 USP34Q70CQ2 3546 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 IGHV3-72A0A0B4J1Y9 119 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 C5orf63A6NC05 138 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 OR4A8P0C604 315 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 CD81P60033 236 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 RNF151Q2KHN1 245 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 ETFRF1Q6IPR1 90 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 FDCSPQ8NFU4 85 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 MARS2Q96GW9 593 aaKnown RBP9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
PCDHGA1-202ENST00000517417 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 K7N7A8 449 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 ZNF506Q5JVG8 444 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 UBTD1Q9HAC8 227 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 PPIAL4EA0A075B759 164 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 AHRRA9YTQ3 701 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 PPIAL4DF5H284 164 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 J3QR06 171 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 PPIAL4FP0DN26 164 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 NPY1RP25929 384 aa9.25□□□□□ -0.93
PCDHGA1-202ENST00000517417 MPV17P39210 176 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms