RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 ADCY9O60503 1353 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 RAB3GAP2Q9H2M9 1393 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 WDFY3Q8IZQ1 3526 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 ABCC10Q5T3U5 1492 aa0.66□□□□□ -2.3
SCARNA1-201ENST00000517138 KIF21AQ7Z4S6 1674 aa0.65□□□□□ -2.3
SCARNA1-201ENST00000517138 PREX1Q8TCU6 1659 aa0.65□□□□□ -2.3
SCARNA1-201ENST00000517138 RNF213Q63HN8 5207 aa0.65□□□□□ -2.3
SCARNA1-201ENST00000517138 MED13LQ71F56 2210 aa0.65□□□□□ -2.3
SCARNA1-201ENST00000517138 HMCN2Q8NDA2 5059 aa0.65□□□□□ -2.3
SCARNA1-201ENST00000517138 CUX1P39880 1505 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 CHD5Q8TDI0 1954 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 C1QCP02747 245 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 ZNF728P0DKX0 622 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 CCL3P10147 92 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 AKR1C4P17516 323 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 SERPINB10P48595 397 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 SULT1A2P50226 295 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 PSG3Q16557 428 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 UNQ6190/PRO20217Q6UXQ8 127 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 SNX12Q9UMY4 172 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 ALG5Q9Y673 324 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 CSMD2Q7Z408 3487 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 LRBAP50851 2863 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 APC2O95996 2303 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 TET3O43151 1660 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 COL12A1Q99715 3063 aa0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 SPENQ96T58 3664 aaKnown RBP0.65□□□□□ -2.31
SCARNA1-201ENST00000517138 PHLPP1O60346 1717 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 BCORL1Q5H9F3 1711 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 ZZEF1O43149 2961 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 FREM2Q5SZK8 3169 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 KMT2DO14686 5537 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 MYO15AQ9UKN7 3530 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 IGKV2-40A0A087WW87 121 aaPredicted RBP0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 IGKV3D-7A0A0C4DH55 119 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 IGKV3OR2-268A0A0C4DH90 116 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 TRBV6-5A0A0K0K1A5 114 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 GSTTP1A0A1W2PQM5 241 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 TMEM235A6NFC5 223 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 C2orf74A8MZ97 194 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 E7EWF7 191 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 H3BSA7 217 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 IGKV2D-40P01614 121 aaPredicted RBP0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 SFTPCP11686 197 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 ORM2P19652 201 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 NKAIN1Q4KMZ8 207 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 FAM45AQ8TCE6 357 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 ASB17Q8WXJ9 295 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 NCOR1P1Q9H4R4 102 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 METTL17Q9H7H0 456 aaPredicted RBP0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 ZCCHC6Q5VYS8 1495 aaKnown RBP0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 MRC2Q9UBG0 1479 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 COL4A5P29400 1685 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 NAV1Q8NEY1 1877 aa0.64□□□□□ -2.31
SCARNA1-201ENST00000517138 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 MDN1Q9NU22 5596 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 FAT3Q8TDW7 4589 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 APCP25054 2843 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 FRMPD1Q5SYB0 1578 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 SVEP1Q4LDE5 3571 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 TRAV41A0A0B4J266 112 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 OR5K4A6NMS3 321 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 PGLYRP1O75594 196 aaPredicted RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 IDH3GP51553 393 aaPredicted RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 ACTBP60709 375 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 ACTG1P63261 375 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 PAFAH1B3Q15102 231 aaKnown RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 TRMT12Q53H54 448 aaKnown RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 LHFPL5Q8TAF8 219 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 BCL7BQ9BQE9 202 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 MED18Q9BUE0 208 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 ARHGEF28Q8N1W1 1705 aaKnown RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 DLC1Q96QB1 1528 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 BLMP54132 1417 aaPredicted RBP0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 CSPG4Q6UVK1 2322 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 CNTRLQ7Z7A1 2325 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 PTPRQQ9UMZ3 2332 aa0.63□□□□□ -2.31
SCARNA1-201ENST00000517138 LINC00862A6NCI5 91 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 ZW10O43264 779 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 ZNF737O75373 536 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 CRYBB3P26998 211 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 FGF12P61328 243 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 RELAQ04206 551 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 STK38Q15208 465 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 HNRNPA1L2Q32P51 320 aaKnown RBP0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 CENPWQ5EE01 88 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 TMEM75Q8N9X5 138 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 OR8B12Q8NGG6 310 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 FNDC9Q8TBE3 224 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 CYGBQ8WWM9 190 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 TRNT1Q96Q11 434 aaKnown RBP0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 HINT2Q9BX68 163 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 DMAC2Q9NW81 257 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 FAM215AQ9Y5M1 114 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 DMXL1Q9Y485 3027 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 ITPR2Q14571 2701 aa0.62□□□□□ -2.31
SCARNA1-201ENST00000517138 CACNA1HO95180 2353 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 DMXL2Q8TDJ6 3036 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 SLC17A3O00476 420 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms