RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EBI3Q14213 229 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 DIAPH2-AS1Q14236 149 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 SSX2Q16385 188 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 PRIMA1Q86XR5 153 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 CCDC71LQ8N9Z2 235 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 POC5Q8NA72 575 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 C17orf50Q8WW18 174 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 ALX4Q9H161 411 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 C5orf66Q9H5L9 145 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 SLC2A9Q9NRM0 540 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 C14orf166Q9Y224 244 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 VSIG4Q9Y279 399 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 FAM96BQ9Y3D0 163 aa9.65□□□□□ -0.86
PDLIM5-220ENST00000514830 FAM240BA0A1B0GVZ2 78 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 CRLF1O75462 422 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 TCRBP04435 133 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 RRASP10301 218 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 SRD5A1P18405 259 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 BRS3P32247 399 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 RAG2P55895 527 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 TAS2R31P59538 309 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 DHODHQ02127 395 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 BAMBIQ13145 260 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 CATR1Q13166 79 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 DEFB112Q30KQ8 113 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 Q6YL49 198 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 IL17RELQ6ZVW7 336 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 NRARPQ7Z6K4 114 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 ZNF383Q8NA42 475 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 RNF5Q99942 180 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 OCEL1Q9H607 264 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 NUBP2Q9Y5Y2 271 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 ANK3Q12955 4377 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 STAB1Q9NY15 2570 aa9.64□□□□□ -0.87
PDLIM5-220ENST00000514830 CRYM-AS1A6NIL9 109 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 LINC00473A8K010 186 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 INAFM1C9JVW0 142 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 H0YJW9 148 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 TIMM23O14925 209 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 MPPED1O15442 326 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 FAM157CP0CG43 387 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 F2RP25116 425 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 IER3P46695 156 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 RAB13P51153 203 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 PIGPP57054 158 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 LRRC75BQ2VPJ9 315 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 ABCA11PQ4W5N1 156 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM128Q5BJH2 165 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 DHRS7BQ6IAN0 325 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 SLC25A42Q86VD7 318 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 PDPNQ86YL7 162 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 BCL6BQ8N143 479 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 CENPSQ8N2Z9 138 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM86BQ8N661 226 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 OR5R1Q8NH85 324 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 ENKURQ8TC29 256 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 PIFOQ8TCI5 191 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 CD300LFQ8TDQ1 290 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 ZNF48Q96MX3 618 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 MARVELD1Q9BSK0 173 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 C20orf85Q9H1P6 137 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 PRELID3BQ9Y3B1 194 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 POMT1Q9Y6A1 747 aa9.63□□□□□ -0.87
PDLIM5-220ENST00000514830 H0Y980 276 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 VENTXO95231 258 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 APOA2P02652 100 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 REG1BP48304 166 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 BRWD1-AS2P59051 145 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 RPL30P62888 115 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 RTL8BQ17RB0 113 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 RGS21Q2M5E4 152 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 PHLDA2Q53GA4 152 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM177Q53S58 311 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 C11orf88Q6PI97 169 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 MOB3BQ86TA1 216 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 TBC1D26Q86UD7 250 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 CADM3Q8N126 398 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 MINDY2Q8NBR6 621 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 SSMEM1Q8WWF3 244 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM158Q8WZ71 300 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 TMEM230Q96A57 120 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 WASHC3Q9Y3C0 194 aa9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 SOX21Q9Y651 276 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-220ENST00000514830 A0A0A6YYJ9 748 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 CLDN34H7C241 214 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 RLN1P04808 185 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 FAM106CPP0CH98 169 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 RPA2P15927 270 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 PI3P19957 117 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 PLET1Q6UQ28 207 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 LIAT1Q6ZQX7 453 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 Q8N6K4 173 aa9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 DRAXINQ8NBI3 349 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-220ENST00000514830 OR8H1Q8NGG4 311 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms