RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 MC5RP33032 325 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 IER3P46695 156 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 FXYD4P59646 89 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 THNSL2Q86YJ6 484 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 ODF3L1Q8IXM7 274 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 CMTM1Q8IZ96 169 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 CAPSLQ8WWF8 208 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 C7orf50Q9BRJ6 194 aaKnown RBP16.21■□□□□ 0.19
USP53-208ENST00000514305 CHIAQ9BZP6 476 aa16.21■□□□□ 0.19
USP53-208ENST00000514305 THBS3P49746 956 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 UCP3P55916 312 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 RELBQ01201 579 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 MFSD4AQ8N468 514 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 TERB2Q8NHR7 220 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 ZFAND1Q8TCF1 268 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 C17orf50Q8WW18 174 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 TRIM63Q969Q1 353 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 AJUBAQ96IF1 538 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 TINAGL1Q9GZM7 467 aaPredicted RBP16.2■□□□□ 0.18
USP53-208ENST00000514305 PARP12Q9H0J9 701 aaKnown RBP16.2■□□□□ 0.18
USP53-208ENST00000514305 MCUBQ9NWR8 336 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 MEGF8Q7Z7M0 2845 aa16.2■□□□□ 0.18
USP53-208ENST00000514305 TRRAPQ9Y4A5 3859 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 OR5H14A6NHG9 310 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 H3BUX3 64 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 APOA2P02652 100 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 RRASP10301 218 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 REG1BP48304 166 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 RAB13P51153 203 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 RPL15P61313 204 aaKnown RBP16.19■□□□□ 0.18
USP53-208ENST00000514305 SCGB2B2Q4G0G5 96 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 LDLRAD2Q5SZI1 272 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 ZNF660Q6AZW8 331 aaPredicted RBP16.19■□□□□ 0.18
USP53-208ENST00000514305 SLC38A6Q8IZM9 456 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 HSD17B10Q99714 261 aaKnown RBP16.19■□□□□ 0.18
USP53-208ENST00000514305 SDHAF2Q9NX18 166 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 PRELID3BQ9Y3B1 194 aa16.19■□□□□ 0.18
USP53-208ENST00000514305 M0R1X1 148 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 TIMM23O14925 209 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 IL7P13232 177 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 PGAM2P15259 253 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 CATR1Q13166 79 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 KLF9Q13886 244 aaPredicted RBP16.18■□□□□ 0.18
USP53-208ENST00000514305 HES1Q14469 280 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 ZNF66Q6ZN08 573 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 C16orf82Q7Z2V1 217 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 DYNAPQ8N1N2 210 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 OR4C16Q8NGL9 310 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 OR2T10Q8NGZ9 312 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 WFDC12Q8WWY7 111 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 ZNF486Q96H40 463 aaPredicted RBP16.18■□□□□ 0.18
USP53-208ENST00000514305 SLC2A8Q9NY64 477 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 C1RLQ9NZP8 487 aa16.18■□□□□ 0.18
USP53-208ENST00000514305 A0A1W2PPI3 338 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 NDUFA7O95182 113 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 HABP2Q14520 560 aaPredicted RBP16.17■□□□□ 0.18
USP53-208ENST00000514305 BAK1Q16611 211 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 RPL39P5Q59GN2 51 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 DRAM1Q8N682 238 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 OR56B4Q8NH76 319 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 NABP2Q9BQ15 211 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 ZNF251Q9BRH9 671 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 HRASLSQ9HDD0 168 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 VPREB3Q9UKI3 123 aa16.17■□□□□ 0.18
USP53-208ENST00000514305 IGKV1D-13A0A0B4J2D9 117 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 GPR31O00270 319 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 IGHV4-59P01825 116 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 IGKV1-13P0DP09 117 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 LSAMPQ13449 338 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 SURF2Q15527 256 aaPredicted RBP16.16■□□□□ 0.18
USP53-208ENST00000514305 RTL8BQ17RB0 113 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 ABCA11PQ4W5N1 156 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 LHFPL1Q86WI0 220 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 POC5Q8NA72 575 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 MRPL20Q9BYC9 149 aaKnown RBP16.16■□□□□ 0.18
USP53-208ENST00000514305 CCL28Q9NRJ3 127 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 TCF19Q9Y242 345 aa16.16■□□□□ 0.18
USP53-208ENST00000514305 CLPSL1A2RUU4 121 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 FAM90A9PA6NNJ1 464 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 H7C2Y5 167 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 KCNAB3O43448 404 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 MOSP00540 346 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 CT45A6P0DMU7 189 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 CT45A5P0DMU8 189 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 CT45A7P0DMV0 189 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 KIR2DS2P43631 304 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 DIAPH2-AS1Q14236 149 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 C11orf88Q6PI97 169 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 PDPNQ86YL7 162 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 BVESQ8NE79 360 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 OR8H1Q8NGG4 311 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 OR4D10Q8NGI6 311 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 TSC22D3Q99576 134 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 SDHCQ99643 169 aaPredicted RBP16.15■□□□□ 0.18
USP53-208ENST00000514305 RNF5Q99942 180 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 C14orf166Q9Y224 244 aaKnown RBP16.15■□□□□ 0.18
USP53-208ENST00000514305 WASHC3Q9Y3C0 194 aa16.15■□□□□ 0.18
USP53-208ENST00000514305 M0QZK8 103 aa16.14■□□□□ 0.17
USP53-208ENST00000514305 SNRNP70P08621 437 aaKnown RBP16.14■□□□□ 0.17
USP53-208ENST00000514305 TMEM11P17152 192 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms