RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 OR51B6Q9H340 312 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 UBQLN4Q9NRR5 601 aa0.97□□□□□ -2.25
TRAPPC11-210ENST00000513600 IGKV1-9A0A0C4DH69 117 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 HMSDA8MTL9 139 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 F5H5K5 113 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 IFNGR2P38484 337 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 DAD1P61803 113 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 EMX1Q04741 257 aaPredicted RBP0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 STX3Q13277 289 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 OR4D1Q15615 310 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 EXOC3L4Q17RC7 722 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 SLC36A1Q7Z2H8 476 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 BAP18Q8IXM2 172 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 PACRGLQ8N7B6 248 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 OR13C8Q8NGS7 320 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 SMIM12Q96EX1 92 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 TMA16Q96EY4 203 aaKnown RBP0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 SERPINB11Q96P15 392 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 OR7D2Q96RA2 312 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 MED9Q9NWA0 146 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 TIMM9Q9Y5J7 89 aa0.96□□□□□ -2.26
TRAPPC11-210ENST00000513600 SYNRGQ9UMZ2 1314 aa0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 RPSAP08865 295 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 PVALBP20472 110 aaPredicted RBP0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 CRATP43155 626 aa0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 RPL27AP46776 148 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 GABRA2P47869 451 aa0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 RBM11P57052 281 aaKnown RBP0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 SPATA31B1PQ5VZV4 182 aa0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 C7orf65Q6ZTY9 151 aa0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 LRRC34Q8IZ02 419 aa0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 ZNF75CPQ92670 426 aaPredicted RBP0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 ZNF514Q96K75 400 aaPredicted RBP0.95□□□□□ -2.26
TRAPPC11-210ENST00000513600 COPEO14579 308 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 MPZL2O60487 215 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 CIAO1O76071 339 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 IVLP07476 585 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 CD79BP40259 229 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 DLX6P56179 175 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 BTN3A2P78410 334 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 LYZL1Q6UWQ5 148 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 OR1L8Q8NGR8 309 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 RORBQ92753 470 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 SFRP2Q96HF1 295 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 HBEGFQ99075 208 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 KIAA0232Q92628 1395 aa0.94□□□□□ -2.26
TRAPPC11-210ENST00000513600 FADS2O95864 444 aaKnown RBP0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 SERPINA7P05543 415 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 S100A9P06702 114 aaKnown RBP0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 SLC35E2BP0CK96 405 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 LCN1P31025 176 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 AQP4P55087 323 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 LRRC75BQ2VPJ9 315 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 DEFB115Q30KQ5 88 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 MBD3L1Q8WWY6 194 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 TLCD1Q96CP7 247 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 NMNAT3Q96T66 252 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 CYTH2Q99418 400 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 GNB1LQ9BYB4 327 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 TTTY13Q9BZ97 58 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 TMEM222Q9H0R3 208 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 POFUT2Q9Y2G5 429 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 POLR3HQ9Y535 204 aaPredicted RBP0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 SCN9AQ15858 1988 aa0.93□□□□□ -2.26
TRAPPC11-210ENST00000513600 HCRTO43612 131 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 ORC5O43913 435 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 CFL1P23528 166 aaKnown RBP0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 TMEM267Q0VDI3 215 aaPredicted RBP0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 MOGQ16653 247 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 AADACL4Q5VUY2 407 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 C1orf174Q8IYL3 243 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 C15orf53Q8NAA6 179 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 ATP6V1C2Q8NEY4 427 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 DYNC2LI1Q8TCX1 351 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 C12orf43Q96C57 262 aaKnown RBP0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 LRRC45Q96CN5 670 aa0.92□□□□□ -2.26
TRAPPC11-210ENST00000513600 NPATQ14207 1427 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 TRAV8-1A0A0A6YYK1 113 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 PLA2G10O15496 165 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 TPM1P09493 284 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 ETV1P50549 477 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 RNASEH2CQ8TDP1 164 aaKnown RBP0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 C19orf60Q96EN9 201 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 CPNE2Q96FN4 548 aaPredicted RBP0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 SIKE1Q9BRV8 207 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 EMC3Q9P0I2 261 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 C22orf24Q9Y442 160 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 RTTNQ86VV8 2226 aa0.91□□□□□ -2.26
TRAPPC11-210ENST00000513600 FAM25EA8MYX2 175 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 CREBL2O60519 120 aaPredicted RBP0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 APOA1P02647 267 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 SYT1P21579 422 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 ALDH3A1P30838 453 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 EMP1P54849 157 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 FXYD7P58549 80 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 FBXO48Q5FWF7 155 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 RBM48Q5RL73 367 aaKnown RBP0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 LCN8Q6JVE9 175 aa0.9□□□□□ -2.27
TRAPPC11-210ENST00000513600 Q8WTZ3 238 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms