RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TRBV9A0A0B4J1U6 114 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 TRBV5-5A0A0J9YX44 114 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 TUSC2O75896 110 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 APOA2P02652 100 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 OR9G9P0C7N8 305 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 APELAP0DMC3 54 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 CBLN1P23435 193 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 APOC4P55056 127 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 GNGT1P63211 74 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 ZNF45Q02386 682 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 DNAL1Q4LDG9 190 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 ZNF57Q68EA5 555 aaPredicted RBP8.13□□□□□ -1.11
DDX41-216ENST00000513562 ZNF880Q6PDB4 577 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 LINC00336Q6ZUF6 198 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 JAGN1Q8N5M9 183 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 OR13C5Q8NGS8 318 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 EDARADDQ8WWZ3 215 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 CACNG8Q8WXS5 425 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 THRSPQ92748 146 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 PHB2Q99623 299 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 C11orf54Q9H0W9 315 aaPredicted RBP8.13□□□□□ -1.11
DDX41-216ENST00000513562 CKLFQ9UBR5 152 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 AASSQ9UDR5 926 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 OAZ3Q9UMX2 235 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 SELENOKQ9Y6D0 94 aa8.13□□□□□ -1.11
DDX41-216ENST00000513562 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 PPP5D1E7EU14 171 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 UBE2CO00762 179 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 NAPSAO96009 420 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 LIMS3P0CW19 117 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 LIMS4P0CW20 117 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 GABRB1P18505 474 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 ATP5G2Q06055 141 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 MRGPRG-AS1Q2M3A8 158 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 ANKRD55Q3KP44 614 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 TM4SF20Q53R12 229 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 FAM209BQ5JX69 171 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 CDH26Q8IXH8 852 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 FAM46BQ96A09 425 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 PTX4Q96A99 478 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 RNF183Q96D59 192 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 SMIM19Q96E16 107 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 SLC35D1Q9NTN3 355 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 OR1A1Q9P1Q5 309 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 MLXQ9UH92 298 aa8.12□□□□□ -1.11
DDX41-216ENST00000513562 PKD1P98161 4303 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 A8MWP6 167 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 GYG2O15488 501 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 GGCTO75223 188 aaKnown RBP8.11□□□□□ -1.11
DDX41-216ENST00000513562 SCAF4O95104 1147 aaKnown RBP8.11□□□□□ -1.11
DDX41-216ENST00000513562 HLA-AP01891 365 aaKnown RBP8.11□□□□□ -1.11
DDX41-216ENST00000513562 PRH1P02810 166 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 FCGR1AP12314 374 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 CEACAM6P40199 344 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 GPHB5Q86YW7 130 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 OR52I1Q8NGK6 324 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 HARBI1Q96MB7 349 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 NEDD4LQ96PU5 975 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 FAAP24Q9BTP7 215 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 KRTAP4-5Q9BYR2 181 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 AMBNQ9NP70 447 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 MRPS18AQ9NVS2 196 aaKnown RBP8.11□□□□□ -1.11
DDX41-216ENST00000513562 AP4S1Q9Y587 144 aa8.11□□□□□ -1.11
DDX41-216ENST00000513562 TRBV5-7A0A0A0MS05 114 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 KIR2DL5BA0A0G2JN68 375 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 KIR2DL5BA0A0G2JPC4 375 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 SAC3D1A6NKF1 404 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
DDX41-216ENST00000513562 OGG1O15527 345 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 OR2C1O95371 312 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 ZBTB25P24278 435 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 MAP2K4P45985 399 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 TCTAP57738 103 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 RPS11P62280 158 aaKnown RBP eCLIP8.1□□□□□ -1.11
DDX41-216ENST00000513562 C15orf32Q32M92 178 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 Q499Y3 187 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 C6orf201Q7Z4U5 140 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 KIR2DL5AQ8N109 375 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 KIR2DL5BQ8NHK3 375 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 SRSF12Q8WXF0 261 aaKnown RBP8.1□□□□□ -1.11
DDX41-216ENST00000513562 CENPNQ96H22 339 aaPredicted RBP8.1□□□□□ -1.11
DDX41-216ENST00000513562 CHMP1AQ9HD42 196 aaPredicted RBP8.1□□□□□ -1.11
DDX41-216ENST00000513562 ZNF221Q9UK13 617 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 HSPG2P98160 4391 aa8.1□□□□□ -1.11
DDX41-216ENST00000513562 TRBV6-6A0A0A6YYG2 114 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 M0R1X1 148 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 MPPED1O15442 326 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 ALPLP05186 524 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 HLA-DRB3P79483 266 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 PRSS8Q16651 343 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 YIF1BQ5BJH7 314 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 BTNL8Q6UX41 500 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 STPG3Q8N7X2 389 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 UXS1Q8NBZ7 420 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.09□□□□□ -1.11
DDX41-216ENST00000513562 OR1L6Q8NGR2 347 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms