RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
TCOF1-211ENST00000513346 MFAP2P55001 183 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 SLC35B1P78383 322 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 RTP5Q14D33 572 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 SFRP2Q96HF1 295 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 HSD17B10Q99714 261 aaKnown RBP9.68□□□□□ -0.86
TCOF1-211ENST00000513346 TMEM106BQ9NUM4 274 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 MS4A18H0YCH9 400 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 IGHV2-5P01817 119 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 CSN3P07498 182 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 SCTP09683 121 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 CD1BP29016 333 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 G6PCP35575 357 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 TMPRSS3P57727 454 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 MS4A18Q3C1V0 323 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 TUSC5Q8IXB3 177 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 ZNF721Q8TF20 911 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 SAP30LQ9HAJ7 183 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 FZR1Q9UM11 496 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 LAMTOR2Q9Y2Q5 125 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 LOC101059948A0A1B0GTJ6 334 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 NPIPB7O75200 414 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 CEACAM1P13688 526 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 CBLN1P23435 193 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 CSN1S1P47710 185 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 PLP1P60201 277 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 RFESDQ8TAC1 157 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 GLRX2Q9NS18 164 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 HIF1ANQ9NWT6 349 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 CLDN16Q9Y5I7 305 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 A6NNC1 897 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 UBE2L3P68036 154 aaKnown RBP9.68□□□□□ -0.86
TCOF1-211ENST00000513346 C1orf194Q5T5A4 169 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 VWCEQ96DN2 955 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 AKAP6Q13023 2319 aa9.68□□□□□ -0.86
TCOF1-211ENST00000513346 NDUFB3O43676 98 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 SMPD2O60906 423 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 GNB1P62873 340 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 WFDC1Q9HC57 220 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 MPC1Q9Y5U8 109 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A26D6RGX4 464 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 MPDU1O75352 247 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 IGHMP01871 453 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 SRIP30626 198 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 RPL23P62829 140 aaKnown RBP9.67□□□□□ -0.86
TCOF1-211ENST00000513346 LRRC10Q5BKY1 277 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 OR2M3Q8NG83 312 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 SAP25Q8TEE9 199 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 GPHA2Q96T91 129 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 TP53BP1Q12888 1972 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-211ENST00000513346 SCN5AQ14524 2016 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 KIAA1644Q3SXP7 199 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 TMEM97Q5BJF2 176 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 SLC25A47Q6Q0C1 308 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 ATOH7Q8N100 152 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 PATJQ8NI35 1801 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 ARHGEF17Q96PE2 2063 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-211ENST00000513346 DEFB108AA8MXU0 73 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 C9JQL5 133 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 EFEMP2O95967 443 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 LIFP15018 202 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 PAQR4Q8N4S7 273 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-211ENST00000513346 PLPPR2Q96GM1 343 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 UCN2Q96RP3 112 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 TM2D1Q9BX74 207 aa9.67□□□□□ -0.86
TCOF1-211ENST00000513346 A8MWP6 167 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 TSPAN2O60636 221 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 NEURL1O76050 574 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 FAM87AP0C7U9 286 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 KHDC1LQ5JSQ8 128 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 OR2M7Q8NG81 312 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 OR10S1Q8NGN2 331 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 ASCL3Q9NQ33 180 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
TCOF1-211ENST00000513346 C1QL2Q7Z5L3 287 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 NIT1Q86X76 327 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 MMD2Q8IY49 270 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 ABHD3Q8WU67 409 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 SCARF2Q96GP6 870 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-211ENST00000513346 TMEM208Q9BTX3 173 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 TMEM210A6NLX4 147 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 HAND1O96004 215 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 BCL2L2Q92843 193 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-211ENST00000513346 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A10PA6NDY2 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A18PA6NE21 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A16PA6NEW6 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A20PA6NIJ5 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A8PA6NJQ4 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A7PA6NKC0 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A22PA8MWA6 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A12PA8MX19 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A5PA8MXJ8 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A23PA8MXZ1 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 SP1P08047 785 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 ADH4P08319 380 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A15PP0C7V4 464 aa9.65□□□□□ -0.86
TCOF1-211ENST00000513346 FAM90A13PP0C7W8 464 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms