RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 EDDM3BP56851 147 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 PPP1R1AQ13522 171 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 Q6P435 159 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 Q8NFD4 153 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 SMDT1Q9H4I9 107 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 C7orf69Q9H7B7 122 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 MPIG6BO95866 241 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 GAPDHP04406 335 aaKnown RBP13.59□□□□□ -0.23
HMGCL-209ENST00000513148 PET100P0DJ07 73 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 VSIG8P0DPA2 414 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 IL13RA2Q14627 380 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 TAF9Q16594 264 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 AWAT1Q58HT5 328 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 TPRX1Q8N7U7 411 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 OR4S1Q8NGB4 309 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 YPEL4Q96NS1 127 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 DCTN5Q9BTE1 182 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 CST11Q9H112 138 aa13.59□□□□□ -0.23
HMGCL-209ENST00000513148 ELOA3CA0A087WX78 387 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-209ENST00000513148 PPIAL4CA0A0B4J2A2 164 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 SLC33A1O00400 549 aaPredicted RBP13.58□□□□□ -0.24
HMGCL-209ENST00000513148 CCSO14618 274 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 IFNA2P01563 188 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 LPAR6P43657 344 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 KRBOX4Q5JUW0 171 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 FAM120AOSQ5T036 256 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 FAM185AQ8N0U4 392 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 AKR1E2Q96JD6 320 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 SNX22Q96L94 193 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 SLC6A7Q99884 636 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 SSX3Q99909 188 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 SLC5A7Q9GZV3 580 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 FAM234AQ9H0X4 552 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 RAB18Q9NP72 206 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 C19orf12Q9NSK7 152 aa13.58□□□□□ -0.24
HMGCL-209ENST00000513148 KIR2DS1A0A191URI9 304 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 TSTD3H0UI37 97 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 BPNT1O95861 308 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 AVPP01185 164 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 PPIAL4GP0DN37 164 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 GATA3P23771 443 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 DDTP30046 118 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 OR3A1P47881 315 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 UNC119Q13432 240 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 HEPN1Q6WQI6 88 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 ONECUT1Q9UBC0 465 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 TRAV24A0A0B4J272 114 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 A0A1W2PPH5 198 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 C9JQL5 133 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 RPL31P62899 125 aaKnown RBP13.57□□□□□ -0.24
HMGCL-209ENST00000513148 BRICD5Q6PL45 260 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 RAB24Q969Q5 203 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 RRNAD1Q96FB5 475 aaKnown RBP13.57□□□□□ -0.24
HMGCL-209ENST00000513148 RSRP1Q9BUV0 290 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 TMEM59Q9BXS4 323 aa13.57□□□□□ -0.24
HMGCL-209ENST00000513148 A0A1B0GW64 132 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 C5orf51A6NDU8 294 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 M0QYG6 137 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 MED6O75586 246 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 ARF6P62330 175 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 RNASE10Q5GAN6 216 aaKnown RBP13.56□□□□□ -0.24
HMGCL-209ENST00000513148 C1orf229Q6ZS94 237 aaPredicted RBP13.56□□□□□ -0.24
HMGCL-209ENST00000513148 ARL6IP6Q8N6S5 226 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 OR5D13Q8NGL4 314 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 KCNG3Q8TAE7 436 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 PPP1R35Q8TAP8 253 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 IFITM10A6NMD0 228 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 J3QLI3 93 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 RAB4AP20338 218 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 LMO1P25800 156 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 SULT1A1P50225 295 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 MPV17LQ2QL34 196 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 LINC00596Q86U02 117 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 OR13D1Q8NGV5 346 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 Q96M66 194 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 PCGF1Q9BSM1 259 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 TAF9BQ9HBM6 251 aa13.56□□□□□ -0.24
HMGCL-209ENST00000513148 MEIS3P1A6NDR6 274 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 TMEM14DPA8MWL7 114 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 H0YIZ8 118 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 MGST3O14880 152 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 LDLRAD4O15165 306 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 JTBO76095 146 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 LY86O95711 162 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 LIPFP07098 398 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 SNRNP70P08621 437 aaKnown RBP13.55□□□□□ -0.24
HMGCL-209ENST00000513148 RAB6AP20340 208 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 HNF1AP20823 631 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 QRFPP83859 136 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 PAX8Q06710 450 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 AESQ08117 197 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 KIAA0141Q14154 515 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-209ENST00000513148 TMEM268Q5VZI3 342 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 SUMF2Q8NBJ7 301 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 LY6G5BQ8NDX9 201 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 NEK7Q8TDX7 302 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 NICN1Q9BSH3 213 aa13.55□□□□□ -0.24
HMGCL-209ENST00000513148 FN1P02751 2386 aaKnown RBP13.55□□□□□ -0.24
HMGCL-209ENST00000513148 hCG_1809904A0A1W2PP81 198 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms