RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NCBP2LA6PVI3 153 aaKnown RBP6.94□□□□□ -1.3
NUP54-211ENST00000512151 G3V318 75 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 J3QL48 77 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 SOCS1O15524 211 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 HPGDSO60760 199 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 OR2H2O95918 312 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 HAND1O96004 215 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 IGHV3-7P01780 117 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 GTF2F2P13984 249 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 GABRR1P24046 479 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 PPIFP30405 207 aaKnown RBP6.94□□□□□ -1.3
NUP54-211ENST00000512151 OR3A1P47881 315 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 RFX2P48378 723 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 PRRX1P54821 245 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 P2RX3P56373 397 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 TMEM50BP56557 158 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 PITPNAQ00169 270 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 GPR176Q14439 515 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 IL13RA2Q14627 380 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 PYDC2Q56P42 97 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 TMEM65Q6PI78 240 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 FAM89BQ8N5H3 189 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 KCNG3Q8TAE7 436 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 LEAP2Q969E1 77 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 TOLLIPQ9H0E2 274 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 OR51J1Q9H342 316 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 SEBOXQ9HB31 216 aaPredicted RBP6.94□□□□□ -1.3
NUP54-211ENST00000512151 RABL2AQ9UBK7 228 aaPredicted RBP6.94□□□□□ -1.3
NUP54-211ENST00000512151 RAB22AQ9UL26 194 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 WSB1Q9Y6I7 421 aa6.94□□□□□ -1.3
NUP54-211ENST00000512151 A0A087X0M5 115 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 TRAV24A0A0B4J272 114 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 A0A1B0GX30 115 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 SIRPB1O00241 398 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 SLC33A1O00400 549 aaPredicted RBP6.93□□□□□ -1.3
NUP54-211ENST00000512151 IGLV1-40P01703 118 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 IGF1P05019 195 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 EIF4EP06730 217 aaKnown RBP6.93□□□□□ -1.3
NUP54-211ENST00000512151 RAB6AP20340 208 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 C17orf58Q2M2W7 97 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 SPIN3Q5JUX0 258 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 CORO2AQ92828 525 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 PTX4Q96A99 478 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 MRPS24Q96EL2 167 aaKnown RBP6.93□□□□□ -1.3
NUP54-211ENST00000512151 CMTM3Q96MX0 182 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 RSRP1Q9BUV0 290 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 TMEM59Q9BXS4 323 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 CST11Q9H112 138 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 PLEKHA3Q9HB20 300 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 PCDHB16Q9NRJ7 776 aa6.93□□□□□ -1.3
NUP54-211ENST00000512151 IZUMO1RA6ND01 250 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 FAM25AB3EWG3 89 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 FAM25CB3EWG5 89 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 FAM25GB3EWG6 89 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 RAB27BO00194 218 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 SH2D1BO14796 132 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 DEGS1O15121 323 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 PLA2G10O15496 165 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 OR7C1O76099 320 aaPredicted RBP6.92□□□□□ -1.3
NUP54-211ENST00000512151 ZNF44P15621 663 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 ELK1P19419 428 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 ERP29P30040 261 aaKnown RBP6.92□□□□□ -1.3
NUP54-211ENST00000512151 GLIPR1P48060 266 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 RAB9AP51151 201 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 SCAND1P57086 179 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 MPV17LQ2QL34 196 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 PLAC9Q5JTB6 97 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 NRARPQ7Z6K4 114 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 Q8N402 240 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 SUMF2Q8NBJ7 301 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 PLPPR1Q8TBJ4 325 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 S1PR3Q99500 378 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 SULT4A1Q9BR01 284 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 C11orf54Q9H0W9 315 aaPredicted RBP6.92□□□□□ -1.3
NUP54-211ENST00000512151 ATG5Q9H1Y0 275 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 GAL3ST2Q9H3Q3 398 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 IFT22Q9H7X7 185 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 RCC2Q9P258 522 aaKnown RBP6.92□□□□□ -1.3
NUP54-211ENST00000512151 ELF5Q9UKW6 265 aaPredicted RBP6.92□□□□□ -1.3
NUP54-211ENST00000512151 KCNK7Q9Y2U2 307 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 ETV7Q9Y603 341 aa6.92□□□□□ -1.3
NUP54-211ENST00000512151 TRGV10A0A0A0MS01 117 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 FAM90A10PA6NDY2 464 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 FAM90A7PA6NKC0 464 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 FAM90A23PA8MXZ1 464 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 J3QR06 171 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 HSPB6O14558 160 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 MGST3O14880 152 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 NFYBP25208 207 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 BLVRBP30043 206 aaPredicted RBP6.91□□□□□ -1.3
NUP54-211ENST00000512151 TALDO1P37837 337 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 REG1BP48304 166 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 MADCAM1Q13477 382 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 IL18Q14116 193 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 ATAD3CQ5T2N8 411 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 HACD4Q5VWC8 232 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 TRIQKQ629K1 86 aa6.91□□□□□ -1.3
NUP54-211ENST00000512151 RAB12Q6IQ22 244 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms