RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 EGLN1Q9GZT9 426 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 MOB4Q9Y3A3 225 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 MOB3BQ86TA1 216 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 KLK15Q9H2R5 256 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ELF5Q9UKW6 265 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 VSIG4Q9Y279 399 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 MEX3AA1L020 520 aaKnown RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 HPRT1P00492 218 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 PLAUP00749 431 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 IGKV3-11P04433 115 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 GP1BAP07359 652 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 KLK2P20151 261 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 OR11H1Q8NG94 326 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 OR11H7Q8NGC8 314 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 OR4S2Q8NH73 311 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ZC3HAV1LQ96H79 300 aaKnown RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ZNF385AQ96PM9 386 aaKnown RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ZNF107Q9UII5 783 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ANAPC1Q9H1A4 1944 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 PIN1P1O15428 100 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 GFRA1P56159 465 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 KLF9Q13886 244 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 SAP25Q8TEE9 199 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ZNF48Q96MX3 618 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 ZDHHC8Q9ULC8 765 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 AUP1Q9Y679 476 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 RAC3P60763 192 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 EIF3IQ13347 325 aaKnown RBP9.4□□□□□ -0.9
CPNE4-209ENST00000512055 SLC36A1Q7Z2H8 476 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 BOD1Q96IK1 185 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 OR8B2Q96RD0 313 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 SRSF6Q13247 344 aaKnown RBP9.4□□□□□ -0.9
CPNE4-209ENST00000512055 C3AR1Q16581 482 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 BIVMQ86UB2 503 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
CPNE4-209ENST00000512055 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 CTDSPLO15194 276 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 UPK3AO75631 287 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 P2RY1P47900 373 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 TNFRSF9Q07011 255 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 LINC01590Q5TEZ4 76 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 ZDHHC23Q8IYP9 409 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 ZADH2Q8N4Q0 377 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 MAP1LC3AQ9H492 121 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 ASCL3Q9NQ33 180 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
CPNE4-209ENST00000512055 DEFB108AA8MXU0 73 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 SOCS1O15524 211 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 CDC14BO60729 498 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 HLA-DQA1P01909 254 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 FGF2P09038 288 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 SCAND1P57086 179 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 C5orf30Q96GV9 206 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 C1orf43Q9BWL3 253 aa9.4□□□□□ -0.91
CPNE4-209ENST00000512055 RIF1Q5UIP0 2472 aaKnown RBP9.4□□□□□ -0.91
CPNE4-209ENST00000512055 A0A1W2PP11 408 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 A6NNC1 897 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 PPIAL4DF5H284 164 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 CHST1O43916 411 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 DEFB124Q8NES8 71 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 DOCK8Q8NF50 2099 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 GDF9O60383 454 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 IGLV3-19P01714 112 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 IFI6P09912 130 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 MAS1LP35410 378 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF415Q09FC8 603 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 ZNF788Q6ZQV5 615 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 NR2C2APQ86WQ0 139 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 THYN1Q9P016 225 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 MRPS18BQ9Y676 258 aaKnown RBP9.39□□□□□ -0.91
CPNE4-209ENST00000512055 TRGV5A0A0B4J1U4 118 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 LIFP15018 202 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 ATP6V0CP27449 155 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 CEACAM6P40199 344 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 TPTE2P1Q5T6R2 138 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 NEUROG1Q92886 237 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 TMEM50AO95807 157 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 NMBP08949 121 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 TFPI2P48307 235 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 FUT6P51993 359 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 GBGT1Q8N5D6 347 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 PERPQ96FX8 193 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 TLNRD1Q9H1K6 362 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 WDR54Q9H977 334 aa9.39□□□□□ -0.91
CPNE4-209ENST00000512055 IGKV3-7A0A075B6H7 116 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 HAX1O00165 279 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 HLA-DQB1P01920 261 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 OR4A8P0C604 315 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 RCC1P18754 421 aaPredicted RBP9.38□□□□□ -0.91
CPNE4-209ENST00000512055 FUT3P21217 361 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 C19orf48Q6RUI8 117 aa9.38□□□□□ -0.91
CPNE4-209ENST00000512055 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms