RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CLINT1Q14677 625 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 EBPQ15125 230 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 IZUMO4Q1ZYL8 232 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 UNC50Q53HI1 259 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CT45A1Q5HYN5 189 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 COL5A1-AS1Q5SY13 56 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 C10orf91Q5T1B1 145 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPATA31B1PQ5VZV4 182 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 FRG2Q64ET8 278 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 ANKRD34AQ69YU3 496 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 HIST2H3AQ71DI3 136 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OAFQ86UD1 273 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPICQ8N5J4 248 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR4K17Q8NGC6 315 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR11H7Q8NGC8 314 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR51A2Q8NGJ7 313 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR1N2Q8NGR9 330 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 CT45A3Q8NHU0 189 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 PNPLA2Q96AD5 504 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SULT4A1Q9BR01 284 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 TNFRSF12AQ9NP84 129 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 SMCO4Q9NRQ5 59 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 UBQLN4Q9NRR5 601 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 TRAPPC2LQ9UL33 140 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 TLN1Q9Y490 2541 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 HEATR5BQ9P2D3 2071 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 RELNP78509 3460 aa4.18□□□□□ -1.74
TRAPPC11-208ENST00000511955 TRAV30A0A087WSZ9 112 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAM240AA0A1B0GVK7 77 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 UBE2QL1A1L167 161 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF726A6NNF4 738 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 M0R2Z0 102 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 TNFRSF11BO00300 401 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNF593O00488 134 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2T1O43869 369 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 GPR137BO60478 399 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 GPANK1O95872 356 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 PRTN3P24158 256 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPL4P36578 427 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 GABRA2P47869 451 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 RAB38P57729 211 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPS13P62277 151 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAM27E3Q08E93 113 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 PMVKQ15126 192 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 PRR22Q8IZ63 422 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2T12Q8NG77 320 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR10G7Q8NGN6 311 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR5W2Q8NH69 310 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZNRF2Q8NHG8 242 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 MFSD8Q8NHS3 518 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMED6Q8WW62 240 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ARPC1AQ92747 370 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 MALSU1Q96EH3 234 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 IP6K3Q96PC2 410 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 TBX15Q96SF7 602 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 GINS4Q9BRT9 223 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 GATA5Q9BWX5 397 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 EBPLQ9BY08 206 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 MRPL16Q9NX20 251 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 KMT2BQ9UMN6 2715 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 MDC1Q14676 2089 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 COL12A1Q99715 3063 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 IGHV3-20A0A0C4DH32 117 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAM236DA0A1B0GTK5 79 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 HSPB6O14558 160 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 FOXS1O43638 330 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 TOMM40O96008 361 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 KNG1P01042 644 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 MT-ND4LP03901 98 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAM236CP0DP71 79 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ZBTB25P24278 435 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 SSR2P43308 183 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 HSPE1P61604 102 aaKnown RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 PYDC2Q56P42 97 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 TNFAIP8L2Q6P589 184 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ALKAL2Q6UX46 152 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 C1QL4Q86Z23 238 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 GBGT1Q8N5D6 347 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR2T33Q8NG76 320 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR13A1Q8NGR1 328 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR13C8Q8NGS7 320 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR51Q1Q8NH59 317 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 ADGRG7Q96K78 797 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPRY4Q9C004 299 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 AICDAQ9GZX7 198 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 REEP1Q9H902 201 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 TAS2R16Q9NYV7 291 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 SLAMF8Q9P0V8 285 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 CES1P1Q9UKY3 287 aa4.17□□□□□ -1.74
TRAPPC11-208ENST00000511955 IGHV2-70DA0A0C4DH43 119 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 LOC100130705A0A1B0GUX0 176 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 IQCMA0A1B0GVH7 501 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 C15orf61A6NNL5 157 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 M0R1B8 84 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 RBFOX2O43251 390 aaKnown RBP eCLIP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAM20BO75063 409 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 GCM2O75603 506 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 NDUFB4O95168 129 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 PMP2P02689 132 aa4.16□□□□□ -1.74
TRAPPC11-208ENST00000511955 LINC00032P0C843 101 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms