RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 DTYMKP23919 212 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 PSMB8P28062 276 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 GNG2P59768 71 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 RPS16P62249 146 aaKnown RBP10.37□□□□□ -0.75
RNF4-215ENST00000511843 CX3CL1P78423 397 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 RNF152Q8N8N0 203 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 YIPF6Q96EC8 236 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 GHITMQ9H3K2 345 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 NECAP2Q9NVZ3 263 aa10.37□□□□□ -0.75
RNF4-215ENST00000511843 DNAH3Q8TD57 4116 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 TRAV18A0A075B6X5 111 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 A0A087WXM4 84 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 A0A1W2PN81 502 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 AIREO43918 545 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 SOX15O60248 233 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 RBBP9O75884 186 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 CA2P00918 260 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 EGR2P11161 476 aaPredicted RBP10.36□□□□□ -0.75
RNF4-215ENST00000511843 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
RNF4-215ENST00000511843 CHRNA7P36544 502 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 MYCNOSP40205 109 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 KRTAP10-11P60412 298 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 PJVKQ0ZLH3 352 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 C19orf54Q5BKX5 351 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 Q6ZS49 121 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 PDPNQ86YL7 162 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.36□□□□□ -0.75
RNF4-215ENST00000511843 BVESQ8NE79 360 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 RCC1LQ96I51 464 aaKnown RBP10.36□□□□□ -0.75
RNF4-215ENST00000511843 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 ZNF580Q9UK33 172 aa10.36□□□□□ -0.75
RNF4-215ENST00000511843 LINC00473A8K010 186 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 IGLV1-40P01703 118 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 IGLV2-23P01705 113 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 RPS19P39019 145 aaKnown RBP10.35□□□□□ -0.75
RNF4-215ENST00000511843 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
RNF4-215ENST00000511843 KIAA0141Q14154 515 aaPredicted RBP10.35□□□□□ -0.75
RNF4-215ENST00000511843 ARL6IP1Q15041 203 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 SRSF7Q16629 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
RNF4-215ENST00000511843 TMEM65Q6PI78 240 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 GVQW1Q8N7I0 195 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 MINDY2Q8NBR6 621 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 GRPEL2Q8TAA5 225 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 MYOZ3Q8TDC0 251 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 FLYWCH2Q96CP2 140 aaKnown RBP10.35□□□□□ -0.75
RNF4-215ENST00000511843 TSNAXQ99598 290 aaKnown RBP10.35□□□□□ -0.75
RNF4-215ENST00000511843 ALX4Q9H161 411 aaPredicted RBP10.35□□□□□ -0.75
RNF4-215ENST00000511843 ETV7Q9Y603 341 aa10.35□□□□□ -0.75
RNF4-215ENST00000511843 IGKV1D-13A0A0B4J2D9 117 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 ARPC1BO15143 372 aaKnown RBP10.34□□□□□ -0.75
RNF4-215ENST00000511843 SCGNO76038 276 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 DIRAS3O95661 229 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 IGKV1-13P0DP09 117 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 GNB1P62873 340 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 SSBP2P81877 361 aaPredicted RBP10.34□□□□□ -0.75
RNF4-215ENST00000511843 TIMM50Q3ZCQ8 353 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 ZNF660Q6AZW8 331 aaPredicted RBP10.34□□□□□ -0.75
RNF4-215ENST00000511843 PPP1R27Q86WC6 154 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 ZNF491Q8N8L2 437 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 LFNGQ8NES3 379 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 C4orf3Q8WVX3 66 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 HARBI1Q96MB7 349 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 RNF5Q99942 180 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 VCX3AQ9NNX9 186 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 NUBP2Q9Y5Y2 271 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 TNCP24821 2201 aa10.34□□□□□ -0.75
RNF4-215ENST00000511843 WI2-2373I1.2A0A1W2PRP0 233 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 MEIS3P1A6NDR6 274 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
RNF4-215ENST00000511843 SLC6A1P30531 599 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 DUTP33316 252 aaKnown RBP10.33□□□□□ -0.76
RNF4-215ENST00000511843 RAB9AP51151 201 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 LUMP51884 338 aaPredicted RBP10.33□□□□□ -0.76
RNF4-215ENST00000511843 CRIP2P52943 208 aaPredicted RBP10.33□□□□□ -0.76
RNF4-215ENST00000511843 NCS1P62166 190 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 PITPNAQ00169 270 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 OR2B11Q5JQS5 317 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 UNQ5815/PRO19632Q6UWF5 114 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 DDB2Q92466 427 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 MS4A10Q96PG2 267 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 GPHA2Q96T91 129 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 DCSTAMPQ9H295 470 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 ANXA10Q9UJ72 324 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 SPATA2Q9UM82 520 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 FOXA2Q9Y261 457 aaPredicted RBP10.33□□□□□ -0.76
RNF4-215ENST00000511843 OR2W1Q9Y3N9 320 aa10.33□□□□□ -0.76
RNF4-215ENST00000511843 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 K7EIL1 84 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 SHOXO15266 292 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 TUSC2O75896 110 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 SPDEFO95238 335 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 DUS4LO95620 317 aaKnown RBP10.32□□□□□ -0.76
RNF4-215ENST00000511843 CRYZL1O95825 349 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 CRYGBP07316 175 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 SCAND1P57086 179 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 RPL30P62888 115 aaKnown RBP10.32□□□□□ -0.76
RNF4-215ENST00000511843 FXYD3Q14802 87 aa10.32□□□□□ -0.76
RNF4-215ENST00000511843 ACTBL2Q562R1 376 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms