RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
COL1A1-213ENST00000511732 OR8U9P0C7N5 309 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 TMEM267Q0VDI3 215 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-213ENST00000511732 ACTBL2Q562R1 376 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 UNQ5815/PRO19632Q6UWF5 114 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 NR2C2APQ86WQ0 139 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 PDPNQ86YL7 162 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 OR10R2Q8NGX6 335 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 MAFIPQ8WZ33 124 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 MS4A10Q96PG2 267 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 CABLES2Q9BTV7 478 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 VCX3BQ9H321 246 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 NDUFB11Q9NX14 153 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 SDHAF2Q9NX18 166 aa11.82□□□□□ -0.52
COL1A1-213ENST00000511732 A0A075B6Q4 140 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 TRBV6-7A0A0A0MS04 114 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 TRDV1A0A1B0GX56 115 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 LINC01619G3V211 115 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 M0R1X1 148 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 PDCD5O14737 125 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 BET1O15155 118 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 SLC25A17O43808 307 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 SPDEFO95238 335 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 IGLV2-23P01705 113 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 INSL3P51460 131 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
COL1A1-213ENST00000511732 WWC2-AS2Q96NR7 200 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 TSNAXQ99598 290 aaKnown RBP11.81□□□□□ -0.52
COL1A1-213ENST00000511732 OR2D2Q9H210 308 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
COL1A1-213ENST00000511732 ELF5Q9UKW6 265 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-213ENST00000511732 IGKV1D-8A0A087WSZ0 117 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 APOA2P02652 100 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 CRYGBP07316 175 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 HIST1H1DP16402 221 aaKnown RBP11.8□□□□□ -0.52
COL1A1-213ENST00000511732 RAB3BP20337 219 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 RAB6AP20340 208 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 SERPINB10P48595 397 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 HSPA13P48723 471 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 PJVKQ0ZLH3 352 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 FXYD3Q14802 87 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 C22orf42Q6IC83 251 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.8□□□□□ -0.52
COL1A1-213ENST00000511732 ARPC1AQ92747 370 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 RHOVQ96L33 236 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 ASCL2Q99929 193 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 RAB26Q9ULW5 256 aa11.8□□□□□ -0.52
COL1A1-213ENST00000511732 SMIM30A4D0T7 59 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 SRRM4A7MD48 611 aaKnown RBP11.79□□□□□ -0.52
COL1A1-213ENST00000511732 NHLRC4P0CG21 123 aaPredicted RBP11.79□□□□□ -0.52
COL1A1-213ENST00000511732 MYL9P24844 172 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 RANBP1P43487 201 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 TPPP2P59282 170 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 MRPS15P82914 257 aaKnown RBP11.79□□□□□ -0.52
COL1A1-213ENST00000511732 PYHIN1Q6K0P9 492 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 ZNF429Q86V71 674 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 OR10J5Q8NHC4 309 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 GRPEL2Q8TAA5 225 aa11.79□□□□□ -0.52
COL1A1-213ENST00000511732 ERICH4A6NGS2 130 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 SAP30O75446 220 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 LY86O95711 162 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 HSPB1P04792 205 aaKnown RBP11.78□□□□□ -0.52
COL1A1-213ENST00000511732 GADD45AP24522 165 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 BVESQ8NE79 360 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 SLA2Q9H6Q3 261 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 U3KQK5 164 aa11.78□□□□□ -0.52
COL1A1-213ENST00000511732 DIRAS3O95661 229 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 TRGV3P03979 118 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 SPNP16150 400 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 GALP22466 123 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 GABARAPL2P60520 117 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 TMEM177Q53S58 311 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 UBE2UQ5VVX9 321 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 H1FOOQ8IZA3 346 aaPredicted RBP11.77□□□□□ -0.53
COL1A1-213ENST00000511732 SPARTQ8N0X7 666 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 DDB2Q92466 427 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 ATG5Q9H1Y0 275 aa11.77□□□□□ -0.53
COL1A1-213ENST00000511732 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.77□□□□□ -0.53
COL1A1-213ENST00000511732 METTL21EPA6NDL7 271 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 LINC00473A8K010 186 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 LGALS7P47929 136 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 SRSF7Q16629 238 aaKnown RBP eCLIP11.76□□□□□ -0.53
COL1A1-213ENST00000511732 Q6ZS49 121 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 POC5Q8NA72 575 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 HARBI1Q96MB7 349 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 GINS4Q9BRT9 223 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 ZNF355PQ9NSJ1 428 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 TXNL4BQ9NX01 149 aaKnown RBP11.76□□□□□ -0.53
COL1A1-213ENST00000511732 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
COL1A1-213ENST00000511732 SHOXO15266 292 aa11.75□□□□□ -0.53
COL1A1-213ENST00000511732 MRPS14O60783 128 aaKnown RBP11.75□□□□□ -0.53
COL1A1-213ENST00000511732 CNIH1O95406 144 aa11.75□□□□□ -0.53
COL1A1-213ENST00000511732 GP9P14770 177 aa11.75□□□□□ -0.53
COL1A1-213ENST00000511732 CD40LGP29965 261 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms