RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 MAP6D1Q9H9H5 199 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 A0A1W2PN81 502 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 LINC01619G3V211 115 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 NBR2O15453 112 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 LANCL1O43813 399 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 LALBAP00709 142 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 IGHV3-11P01762 117 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 LGALS1P09382 135 aaKnown RBP5.08□□□□□ -1.6
COPS4-209ENST00000511653 CHRNA7P36544 502 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 PPP1CCP36873 323 aaKnown RBP5.08□□□□□ -1.6
COPS4-209ENST00000511653 LRRC36Q1X8D7 754 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 MEDAGQ5VYS4 303 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 LINC00596Q86U02 117 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 GAPTQ8N292 157 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 TMEM116Q8NCL8 245 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 TMEM170AQ8WVE7 144 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 APH1BQ8WW43 257 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 ZNF184Q99676 751 aaPredicted RBP5.08□□□□□ -1.6
COPS4-209ENST00000511653 NABP2Q9BQ15 211 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 TRAPPC2LQ9UL33 140 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 A3GALT2U3KPV4 340 aa5.08□□□□□ -1.6
COPS4-209ENST00000511653 HERC2O95714 4834 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 TRAV8-7A0A075B6U6 113 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 SAA2-SAA4A0A096LPE2 208 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 SPINT2O43291 252 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 NDUFA3O95167 84 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 CD2P06729 351 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 SAA2P0DJI9 122 aaPredicted RBP5.07□□□□□ -1.6
COPS4-209ENST00000511653 IGFBP3P17936 291 aaPredicted RBP5.07□□□□□ -1.6
COPS4-209ENST00000511653 BDKRB2P30411 391 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 GBX2P52951 348 aaPredicted RBP5.07□□□□□ -1.6
COPS4-209ENST00000511653 MORN2Q502X0 79 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 SIGIRRQ6IA17 410 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 RAB12Q6IQ22 244 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 OR6Q1Q8NGQ2 317 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 GPR148Q8TDV2 347 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 PYDC1Q8WXC3 89 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 ISOC1Q96CN7 298 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 MRPL48Q96GC5 212 aaKnown RBP5.07□□□□□ -1.6
COPS4-209ENST00000511653 FAM103A1Q9BTL3 118 aaKnown RBP5.07□□□□□ -1.6
COPS4-209ENST00000511653 TAF9BQ9HBM6 251 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 TMEM138Q9NPI0 162 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 GAB2Q9UQC2 676 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 LRRC42Q9Y546 428 aa5.07□□□□□ -1.6
COPS4-209ENST00000511653 DNAH6Q9C0G6 4158 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 FCN1O00602 326 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 PAGE4O60829 102 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 FADS2O95864 444 aaKnown RBP5.06□□□□□ -1.6
COPS4-209ENST00000511653 SCGB1D1O95968 90 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 OR8U9P0C7N5 309 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 GTF2F2P13984 249 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 ETV1P50549 477 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 ALDH3A2P51648 485 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 CRIP2P52943 208 aaPredicted RBP5.06□□□□□ -1.6
COPS4-209ENST00000511653 PPP3R1P63098 170 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 PITPNAQ00169 270 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 RAB40BQ12829 278 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 MRPL28Q13084 256 aaKnown RBP5.06□□□□□ -1.6
COPS4-209ENST00000511653 TMEM30BQ3MIR4 351 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 OR2G6Q5TZ20 316 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 FAM131AQ6UXB0 335 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 ZNF833PQ6ZTB9 187 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 STX19Q8N4C7 294 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 CBR4Q8N4T8 237 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 NPBQ8NG41 125 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 MRPL30Q8TCC3 161 aaKnown RBP5.06□□□□□ -1.6
COPS4-209ENST00000511653 S100A13Q99584 98 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 ZNF251Q9BRH9 671 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 PARP12Q9H0J9 701 aaKnown RBP5.06□□□□□ -1.6
COPS4-209ENST00000511653 IFI27L2Q9H2X8 130 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 FBXL15Q9H469 300 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 BANF2Q9H503 90 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 OR2S2Q9NQN1 319 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 FOXA2Q9Y261 457 aaPredicted RBP5.06□□□□□ -1.6
COPS4-209ENST00000511653 GMPPBQ9Y5P6 360 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 PEX16Q9Y5Y5 336 aa5.06□□□□□ -1.6
COPS4-209ENST00000511653 TRBV5-5A0A0J9YX44 114 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 SNTNA6NMZ2 147 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 MCRIP1C9JLW8 97 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 H3BNX3 289 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 HSPA12AO43301 675 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 ZNF780AO75290 641 aaPredicted RBP5.05□□□□□ -1.6
COPS4-209ENST00000511653 SC5DO75845 299 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 IGLV1-51P01701 117 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 VEGFCP49767 419 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 RPS11P62280 158 aaKnown RBP eCLIP5.05□□□□□ -1.6
COPS4-209ENST00000511653 CX3CL1P78423 397 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 SMN1Q16637 294 aaKnown RBP5.05□□□□□ -1.6
COPS4-209ENST00000511653 RPL39P5Q59GN2 51 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 C6orf141Q5SZD1 244 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 RPL22L1Q6P5R6 122 aaKnown RBP5.05□□□□□ -1.6
COPS4-209ENST00000511653 GLIPR1L1Q6UWM5 242 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 GLDNQ6ZMI3 551 aaPredicted RBP5.05□□□□□ -1.6
COPS4-209ENST00000511653 LYPD6Q86Y78 171 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 ZFP41Q8N8Y5 198 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 RHOXF1Q8NHV9 184 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 SMIM19Q96E16 107 aa5.05□□□□□ -1.6
COPS4-209ENST00000511653 MS4A10Q96PG2 267 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms