RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SOX15O60248 233 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 SPDEFO95238 335 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 EGR2P11161 476 aaPredicted RBP17.86■□□□□ 0.45
SNF8-209ENST00000510558 TALDO1P37837 337 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 LUMP51884 338 aaPredicted RBP17.86■□□□□ 0.45
SNF8-209ENST00000510558 RUNX1Q01196 453 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 ZNF773Q6PK81 442 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 TCTEX1D1Q8N7M0 179 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 OR5B12Q96R08 314 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 SLC35D1Q9NTN3 355 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 ZMAT5Q9UDW3 170 aaKnown RBP17.86■□□□□ 0.45
SNF8-209ENST00000510558 SSR3Q9UNL2 185 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 NUBP2Q9Y5Y2 271 aa17.86■□□□□ 0.45
SNF8-209ENST00000510558 SNRPBP14678 240 aaKnown RBP17.85■□□□□ 0.45
SNF8-209ENST00000510558 DGCR2P98153 550 aa17.85■□□□□ 0.45
SNF8-209ENST00000510558 TMEM267Q0VDI3 215 aaPredicted RBP17.85■□□□□ 0.45
SNF8-209ENST00000510558 ARL6IP1Q15041 203 aa17.85■□□□□ 0.45
SNF8-209ENST00000510558 C9orf66Q5T8R8 295 aa17.85■□□□□ 0.45
SNF8-209ENST00000510558 TPRA1Q86W33 373 aa17.85■□□□□ 0.45
SNF8-209ENST00000510558 FLYWCH2Q96CP2 140 aaKnown RBP17.85■□□□□ 0.45
SNF8-209ENST00000510558 GINS4Q9BRT9 223 aa17.85■□□□□ 0.45
SNF8-209ENST00000510558 FAM103A1Q9BTL3 118 aaKnown RBP17.85■□□□□ 0.45
SNF8-209ENST00000510558 SDHAF2Q9NX18 166 aa17.85■□□□□ 0.45
SNF8-209ENST00000510558 ELF5Q9UKW6 265 aaPredicted RBP17.85■□□□□ 0.45
SNF8-209ENST00000510558 SEC14L6B5MCN3 397 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 CA2P00918 260 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 GNB1P62873 340 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 ZNF616Q08AN1 781 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 SRSF7Q16629 238 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNF8-209ENST00000510558 ASPHD1Q5U4P2 390 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 ZNF562Q6V9R5 426 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 Q6ZS49 121 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 PPP1R27Q86WC6 154 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 OR1N2Q8NGR9 330 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNF8-209ENST00000510558 TPSG1Q9NRR2 321 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 DAPK2Q9UIK4 370 aa17.84■□□□□ 0.45
SNF8-209ENST00000510558 SLC25A17O43808 307 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 OR8U8P0C7N1 319 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 DTYMKP23919 212 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 CDNFQ49AH0 187 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 UNQ5815/PRO19632Q6UWF5 114 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 CASTOR1Q8WTX7 329 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 C5orf30Q96GV9 206 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 CENPOQ9BU64 300 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 OR51E2Q9H255 320 aa17.83■□□□□ 0.44
SNF8-209ENST00000510558 RBM7Q9Y580 266 aaKnown RBP17.83■□□□□ 0.44
SNF8-209ENST00000510558 IGKV1D-8A0A087WSZ0 117 aa17.82■□□□□ 0.44
SNF8-209ENST00000510558 RAMP3O60896 148 aa17.82■□□□□ 0.44
SNF8-209ENST00000510558 AKIRIN2Q53H80 203 aa17.82■□□□□ 0.44
SNF8-209ENST00000510558 ACTBL2Q562R1 376 aa17.82■□□□□ 0.44
SNF8-209ENST00000510558 RRP15Q9Y3B9 282 aaKnown RBP17.82■□□□□ 0.44
SNF8-209ENST00000510558 PYHIN1Q6K0P9 492 aa17.81■□□□□ 0.44
SNF8-209ENST00000510558 SFXN4Q6P4A7 337 aa17.81■□□□□ 0.44
SNF8-209ENST00000510558 H1FOOQ8IZA3 346 aaPredicted RBP17.81■□□□□ 0.44
SNF8-209ENST00000510558 LFNGQ8NES3 379 aa17.81■□□□□ 0.44
SNF8-209ENST00000510558 LGALS14Q8TCE9 139 aa17.81■□□□□ 0.44
SNF8-209ENST00000510558 ARPC1AQ92747 370 aa17.81■□□□□ 0.44
SNF8-209ENST00000510558 ALX4Q9H161 411 aaPredicted RBP17.81■□□□□ 0.44
SNF8-209ENST00000510558 IGLV2-23P01705 113 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 SDC2P34741 201 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 LGALS7P47929 136 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 ZNF260Q3ZCT1 412 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 HACD4Q5VWC8 232 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 GRPEL2Q8TAA5 225 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 HARBI1Q96MB7 349 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 SCOCQ9UIL1 159 aa17.8■□□□□ 0.44
SNF8-209ENST00000510558 ARPC1BO15143 372 aaKnown RBP17.79■□□□□ 0.44
SNF8-209ENST00000510558 SCGNO76038 276 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 LGALS1P09382 135 aaKnown RBP17.79■□□□□ 0.44
SNF8-209ENST00000510558 TAGLNQ01995 201 aaKnown RBP17.79■□□□□ 0.44
SNF8-209ENST00000510558 CBX3Q13185 183 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 DCTN2Q13561 401 aaKnown RBP17.79■□□□□ 0.44
SNF8-209ENST00000510558 FXYD3Q14802 87 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 BVESQ8NE79 360 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 NUDCD2Q8WVJ2 157 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 ST6GALNAC5Q9BVH7 336 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 RNF167Q9H6Y7 350 aa17.79■□□□□ 0.44
SNF8-209ENST00000510558 TMEM235A6NFC5 223 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 CRYGBP07316 175 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 CLEC2LP0C7M8 214 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 MXD1Q05195 221 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 NEDD8Q15843 81 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 RTL8BQ17RB0 113 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 TMEM177Q53S58 311 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 DCUN1D4Q92564 292 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 MS4A10Q96PG2 267 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 DCSTAMPQ9H295 470 aa17.78■□□□□ 0.44
SNF8-209ENST00000510558 LOC100506127A0A0U1RQW1 187 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 SHOXO15266 292 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 RRASP10301 218 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 CD40LGP29965 261 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 DUTP33316 252 aaKnown RBP17.77■□□□□ 0.44
SNF8-209ENST00000510558 ECI1P42126 302 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 TPPP2P59282 170 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 SSBP2P81877 361 aaPredicted RBP17.77■□□□□ 0.44
SNF8-209ENST00000510558 PITPNAQ00169 270 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 CD69Q07108 199 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 PJVKQ0ZLH3 352 aa17.77■□□□□ 0.44
SNF8-209ENST00000510558 KCTD21Q4G0X4 260 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms