RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 B4DEV8 164 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 UBE2KP61086 200 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 CTAG1AP78358 180 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 LRRC75BQ2VPJ9 315 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 CYB561D1Q8N8Q1 229 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 TOLLIPQ9H0E2 274 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 SEBOXQ9HB31 216 aaPredicted RBP13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 CISD1Q9NZ45 108 aaKnown RBP13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 KCNIP1Q9NZI2 227 aa13.41□□□□□ -0.26
SQSTM1-213ENST00000510187 CHD6Q8TD26 2715 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 H3BP45 60 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 HAND1O96004 215 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 S100A9P06702 114 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 TUBG1P23258 451 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 TAGLN2P37802 199 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 CEACAM6P40199 344 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 PMS2P11Q13670 270 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 ZNF645Q8N7E2 425 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 KLF14Q8TD94 323 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 PINX1Q96BK5 328 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 TUBG2Q9NRH3 451 aa13.4□□□□□ -0.26
SQSTM1-213ENST00000510187 AP4M1O00189 453 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 CDIPTO14735 213 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 SLC35E4Q6ICL7 350 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 ADAM5Q6NVV9 412 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 TCTEX1D1Q8N7M0 179 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 PLPPR2Q96GM1 343 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 OR14J1Q9UGF5 321 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 TIMM9Q9Y5J7 89 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 HEATR1Q9H583 2144 aaKnown RBP13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 SPTBN1Q01082 2364 aaKnown RBP13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 BCL2P10415 239 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 IAPPP10997 89 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 GCH1P30793 250 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 GLRXP35754 106 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 MPV17P39210 176 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 FABP6P51161 128 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 NKX6-1P78426 367 aaPredicted RBP13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 DLK1P80370 383 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 PNRC1Q12796 327 aaPredicted RBP13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 PSG7Q13046 419 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 ZNF718Q3SXZ3 478 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 NCMAPQ5T1S8 102 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 LILRB2Q8N423 598 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 PRR18Q8N4B5 295 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 P2RX4Q99571 388 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 RPRMQ9NS64 109 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 FZR1Q9UM11 496 aa13.39□□□□□ -0.27
SQSTM1-213ENST00000510187 CADP27708 2225 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 TRAV39A0A0B4J263 110 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 A0A1W2PPE3 182 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 H0YL77 283 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 ARL16Q0P5N6 197 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 FABP9Q0Z7S8 132 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 TMEM41BQ5BJD5 291 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 ZNF787Q6DD87 383 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 HAPLN4Q86UW8 402 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 GALMQ96C23 342 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 RSG1Q9BU20 258 aa13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 WDR61Q9GZS3 305 aaKnown RBP13.38□□□□□ -0.27
SQSTM1-213ENST00000510187 OOEPA6NGQ2 149 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 C3orf80F5H4A9 247 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 IFNA1P01562 189 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 P0C879 139 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 ZNF16P17020 682 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 GLIPR1P48060 266 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 CATR1Q13166 79 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 EIF4EBP1Q13541 118 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 MBNL2Q5VZF2 373 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 FGFRL1Q8N441 504 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 NUP37Q8NFH4 326 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 TCTEX1D2Q8WW35 142 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 CXXC4Q9H2H0 198 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 HSPB7Q9UBY9 170 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 HCFC1P51610 2035 aa13.37□□□□□ -0.27
SQSTM1-213ENST00000510187 C19orf84I3L1E1 186 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 NDUFS6O75380 124 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 CD3EP07766 207 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 RNF224P0DH78 156 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 B2MP61769 119 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 TNFRSF9Q07011 255 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 ATP6V1FQ16864 119 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 CENPVQ7Z7K6 275 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 RCC1LQ96I51 464 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 ZNF251Q9BRH9 671 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 GNG13Q9P2W3 67 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 ANKHD1Q8IWZ3 2542 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 TIMM8AO60220 97 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 GRPP07492 148 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 CEBPGP53567 150 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 OR2B8PP59922 312 aa13.36□□□□□ -0.27
SQSTM1-213ENST00000510187 SLC38A11Q08AI6 406 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms