RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 PARP11Q9NR21 331 aa16.74■□□□□ 0.27
UBE2D3-229ENST00000510129 ELF5Q9UKW6 265 aaPredicted RBP16.74■□□□□ 0.27
UBE2D3-229ENST00000510129 OR2W1Q9Y3N9 320 aa16.74■□□□□ 0.27
UBE2D3-229ENST00000510129 TRAV41A0A0B4J266 112 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 G3V4G9 280 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 ATP6V0E1O15342 81 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 RPS19P39019 145 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 LUMP51884 338 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 CRIP2P52943 208 aaPredicted RBP16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 PSG5Q15238 335 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 UBE2NLQ5JXB2 153 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 C1QL4Q86Z23 238 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 MCRIP2Q9BUT9 160 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 FBXL15Q9H469 300 aa16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 METTL1Q9UBP6 276 aaKnown RBP16.73■□□□□ 0.27
UBE2D3-229ENST00000510129 IGKV1D-8A0A087WSZ0 117 aa16.72■□□□□ 0.27
UBE2D3-229ENST00000510129 IGKV1-16P04430 117 aa16.72■□□□□ 0.27
UBE2D3-229ENST00000510129 PSMB8P28062 276 aa16.72■□□□□ 0.27
UBE2D3-229ENST00000510129 ZNF562Q6V9R5 426 aa16.72■□□□□ 0.27
UBE2D3-229ENST00000510129 FUNDC2Q9BWH2 189 aa16.72■□□□□ 0.27
UBE2D3-229ENST00000510129 XRCC3O43542 346 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 HLA-DQB1P01920 261 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 RPLP1P05386 114 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 ARPC4P59998 168 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 LSM3P62310 102 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 CX3CL1P78423 397 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 PYHIN1Q6K0P9 492 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 ZNF645Q8N7E2 425 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 BEST4Q8NFU0 473 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 OR13F1Q8NGS4 319 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 SLC25A46Q96AG3 418 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 AUNIPQ9H7T9 357 aa16.71■□□□□ 0.27
UBE2D3-229ENST00000510129 SSX5O60225 188 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 IGLV1-40P01703 118 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 CD40LGP29965 261 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 PPIFP30405 207 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 OXLD1Q5BKU9 147 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 C8orf86Q6ZUL3 223 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 HOGA1Q86XE5 327 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 LINC00482Q8N8I6 264 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 MINDY2Q8NBR6 621 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 C4orf3Q8WVX3 66 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 RBMXL1Q96E39 390 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 UBE2E2Q96LR5 201 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 CMTM3Q96MX0 182 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 WSB1Q9Y6I7 421 aa16.7■□□□□ 0.26
UBE2D3-229ENST00000510129 AKIRIN2Q53H80 203 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 TMEM177Q53S58 311 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 PPP1R27Q86WC6 154 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 MRPL41Q8IXM3 137 aaKnown RBP16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 SAMD12Q8N8I0 201 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 ABHD5Q8WTS1 349 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 ACOT12Q8WYK0 555 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 DPF1Q92782 380 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 HARBI1Q96MB7 349 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 NECAP2Q9NVZ3 263 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 FOXA2Q9Y261 457 aaPredicted RBP16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 PRELID3BQ9Y3B1 194 aa16.69■□□□□ 0.26
UBE2D3-229ENST00000510129 G3V318 75 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 SHOXO15266 292 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 NFYAP23511 347 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 DUTP33316 252 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 TGFBR1P36897 503 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 TMEM69Q5SWH9 247 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 OR5M8Q8NGP6 311 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 OSR1Q8TAX0 266 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 MYOZ3Q8TDC0 251 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 P2RX4Q99571 388 aa16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 ZMAT5Q9UDW3 170 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 MRPS7Q9Y2R9 242 aaKnown RBP16.68■□□□□ 0.26
UBE2D3-229ENST00000510129 CCL24O00175 119 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 SLC25A17O43808 307 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 CREBL2O60519 120 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 IGLL1P15814 213 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 MSMO1Q15800 293 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 ECSCRQ19T08 205 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 VMA21Q3ZAQ7 101 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 ETV3LQ6ZN32 361 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 BVESQ8NE79 360 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 DDB2Q92466 427 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 TMEM68Q96MH6 324 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 HSD17B10Q99714 261 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 IFT46Q9NQC8 304 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 VSIG4Q9Y279 399 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 NUBP2Q9Y5Y2 271 aa16.67■□□□□ 0.26
UBE2D3-229ENST00000510129 SMIM31A0A1B0GVY4 71 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 FCN1O00602 326 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 TUSC2O75896 110 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 CA2P00918 260 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 RAB9AP51151 201 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 RORCP51449 518 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 LINC00205P59089 165 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 ACTBL2Q562R1 376 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 AP3S1Q92572 193 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 ARPC1AQ92747 370 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 BORCS5Q969J3 196 aa16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 RBMX2Q9Y388 322 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-229ENST00000510129 NOTCH1P46531 2555 aa16.65■□□□□ 0.26
UBE2D3-229ENST00000510129 A0A1W2PN81 502 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms