RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PIP4P1Q86T03 277 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 C1orf87Q8N0U7 546 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 EDARADDQ8WWZ3 215 aa14.98□□□□□ -0.01
CCHCR1-228ENST00000509552 CTXND1A0A1B0GTU2 59 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 LINC00473A8K010 186 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 IGKV1D-33P01593 117 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 IGKV1-33P01594 117 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 EDDM3AQ14507 147 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 P2RY6Q15077 328 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 ACSM6Q6P461 480 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 ZNF709Q8N972 641 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 ZDHHC16Q969W1 377 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 MARCH11A6NNE9 402 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 PMS2P5A8MQ11 134 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 FTH1P19P0C7X4 201 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 HOXA5P20719 270 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 PSMB3P49720 205 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 MEF2BQ02080 365 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 PAX5Q02548 391 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 BHLHA15Q7RTS1 189 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 CD177Q8N6Q3 437 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 DEFB124Q8NES8 71 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 OR2Z1Q8NG97 314 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 OR10G9Q8NGN4 311 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 OR10G7Q8NGN6 311 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 OR13D1Q8NGV5 346 aa14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 OPN3Q9H1Y3 402 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 ZNF71Q9NQZ8 489 aaPredicted RBP14.97□□□□□ -0.01
CCHCR1-228ENST00000509552 GPR12P47775 334 aa14.96□□□□□ -0.01
CCHCR1-228ENST00000509552 NDUFA6P56556 154 aa14.96□□□□□ -0.01
CCHCR1-228ENST00000509552 ASCL3Q9NQ33 180 aa14.96□□□□□ -0.01
CCHCR1-228ENST00000509552 CACNA1DQ01668 2161 aa14.96□□□□□ -0.01
CCHCR1-228ENST00000509552 DIDO1Q9BTC0 2240 aaKnown RBP14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 C15orf65H3BRN8 121 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 GZMHP20718 246 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 RND2P52198 227 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 LTC4SQ16873 150 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 FFAR4Q5NUL3 377 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 PPP1R35Q8TAP8 253 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 FAM210BQ96KR6 192 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 AGMATQ9BSE5 352 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 ACTR3CQ9C0K3 210 aaPredicted RBP14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 CTDSP1Q9GZU7 261 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 SLC25A22Q9H936 323 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 USF3Q68DE3 2245 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 A0A1B0GWJ7 208 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 C17orf112F2Z3M2 114 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 TNFSF13O75888 250 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 R3HDM4Q96D70 268 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 STARD4Q96DR4 205 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 SMIM7Q9BQ49 75 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 DOK5Q9P104 306 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 GNG12Q9UBI6 72 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 NAT8Q9UHE5 227 aa14.95□□□□□ -0.02
CCHCR1-228ENST00000509552 PRRC2CQ9Y520 2896 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 SPAARA0A1B0GVQ0 90 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 TGOLN2O43493 480 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 FABP1P07148 127 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 CDX1P47902 265 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 CD81P60033 236 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 GNB2P62879 340 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 WDR25Q64LD2 544 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 FAM169BQ8N8A8 192 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 DCTN5Q9BTE1 182 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 NPCDR1Q9BY65 106 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 YIF1AO95070 293 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 LY86O95711 162 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 OPN1MWP04001 364 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 OPN1MW2P0DN77 364 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 OPN1MW3P0DN78 364 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 WT1P19544 449 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 LINC00205P59089 165 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 RPS16P62249 146 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 VWC2Q2TAL6 325 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 SPINK9Q5DT21 86 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 FAM90A1Q86YD7 464 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 MANBALQ9NQG1 85 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 DUSP13Q9UII6 198 aa14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 CHD3Q12873 2000 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-228ENST00000509552 CACNA1GO43497 2377 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 SRRM5B3KS81 715 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 HMGB3O15347 200 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 TRGC2P03986 189 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 TFF3Q07654 80 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 TMEM241Q24JQ0 296 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 DEFB109BQ30KR1 87 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 NCR3LG1Q68D85 454 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 FAM216AQ8WUB2 273 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 JPT1Q9UK76 154 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 TMEM250H0YL14 139 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 MGST3O14880 152 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 CGAP01215 116 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 DUTP33316 252 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 CYP2G1PQ6ZSU1 146 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 SNX22Q96L94 193 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 SLC25A15Q9Y619 301 aa14.93□□□□□ -0.02
CCHCR1-228ENST00000509552 HIST1H2BKO60814 126 aa14.92□□□□□ -0.02
CCHCR1-228ENST00000509552 FCGR3BO75015 233 aa14.92□□□□□ -0.02
CCHCR1-228ENST00000509552 KBTBD11O94819 623 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms