RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 RABL2BQ9UNT1 228 aa16■□□□□ 0.15
HOXC6-204ENST00000509328 IGHG2P01859 326 aa15.99■□□□□ 0.15
HOXC6-204ENST00000509328 PMP2P02689 132 aa15.99■□□□□ 0.15
HOXC6-204ENST00000509328 DYRK1AQ13627 763 aa15.99■□□□□ 0.15
HOXC6-204ENST00000509328 SLC35D1Q9NTN3 355 aa15.99■□□□□ 0.15
HOXC6-204ENST00000509328 NDUFA13Q9P0J0 144 aa15.99■□□□□ 0.15
HOXC6-204ENST00000509328 KIAA1456Q9P272 454 aa15.99■□□□□ 0.15
HOXC6-204ENST00000509328 NDUFA3O95167 84 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 IGLV2-14P01704 120 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 CNTFRP26992 372 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 HLA-DMAP28067 261 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 DUTP33316 252 aaKnown RBP15.98■□□□□ 0.15
HOXC6-204ENST00000509328 HRH1P35367 487 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 RFX2P48378 723 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 MRPS10P82664 201 aaKnown RBP15.98■□□□□ 0.15
HOXC6-204ENST00000509328 MSMO1Q15800 293 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 TET2Q6N021 2002 aaPredicted RBP15.98■□□□□ 0.15
HOXC6-204ENST00000509328 DHRS11Q6UWP2 260 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 SLC35E3Q7Z769 313 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 OR52I2Q8NH67 350 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 WIPF2Q8TF74 440 aaPredicted RBP15.98■□□□□ 0.15
HOXC6-204ENST00000509328 FCAMRQ8WWV6 532 aa15.98■□□□□ 0.15
HOXC6-204ENST00000509328 RBMX2Q9Y388 322 aaKnown RBP15.98■□□□□ 0.15
HOXC6-204ENST00000509328 IGKV1-16P04430 117 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 RRASP10301 218 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 CBX3Q13185 183 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 RNASE12Q5GAN4 147 aaKnown RBP15.97■□□□□ 0.15
HOXC6-204ENST00000509328 PYHIN1Q6K0P9 492 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 SECTM1Q8WVN6 248 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 DDB2Q92466 427 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 FLYWCH2Q96CP2 140 aaKnown RBP15.97■□□□□ 0.15
HOXC6-204ENST00000509328 MMP27Q9H306 513 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 KLK11Q9UBX7 282 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 MTFP1Q9UDX5 166 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 A3GALT2U3KPV4 340 aa15.97■□□□□ 0.15
HOXC6-204ENST00000509328 LINC00473A8K010 186 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 GABARAPH6UMI1 98 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 KCNAB3O43448 404 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 TNFSF8P32971 234 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 FXYD4P59646 89 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 HERV-K104P61576 105 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 RPS16P62249 146 aaKnown RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 IL18Q14116 193 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 RTL8BQ17RB0 113 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 C5orf64Q2M2E5 130 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 ACTBL2Q562R1 376 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 ZNF660Q6AZW8 331 aaPredicted RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 CENPVQ7Z7K6 275 aaPredicted RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 FOXRED2Q8IWF2 684 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 BVESQ8NE79 360 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 SGMS2Q8NHU3 365 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 DGCR14Q96DF8 476 aaKnown RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 TSNAXQ99598 290 aaKnown RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 HSD17B10Q99714 261 aaKnown RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 ZNF2Q9BSG1 426 aaPredicted RBP15.96■□□□□ 0.15
HOXC6-204ENST00000509328 SLC5A7Q9GZV3 580 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 CCL28Q9NRJ3 127 aa15.96■□□□□ 0.15
HOXC6-204ENST00000509328 RRHO14718 337 aa15.95■□□□□ 0.14
HOXC6-204ENST00000509328 CTDSPLO15194 276 aa15.95■□□□□ 0.14
HOXC6-204ENST00000509328 ZBTB34Q8NCN2 500 aa15.95■□□□□ 0.14
HOXC6-204ENST00000509328 OR6F1Q8NGZ6 308 aa15.95■□□□□ 0.14
HOXC6-204ENST00000509328 MOB3AQ96BX8 217 aa15.95■□□□□ 0.14
HOXC6-204ENST00000509328 ZNF107Q9UII5 783 aaPredicted RBP15.95■□□□□ 0.14
HOXC6-204ENST00000509328 DPPA5A6NC42 116 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 LINC01548A6NM66 108 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 AP4M1O00189 453 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 FBXO24O75426 580 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 SPDEFO95238 335 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 HLA-DRB1P01911 266 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 LGALS7P47929 136 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 TSPAN5P62079 268 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 DGCR2P98153 550 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 SSBP1Q04837 148 aaKnown RBP15.94■□□□□ 0.14
HOXC6-204ENST00000509328 EIF4EBP1Q13541 118 aaPredicted RBP15.94■□□□□ 0.14
HOXC6-204ENST00000509328 PSG5Q15238 335 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 TMEM177Q53S58 311 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 LIN54Q6MZP7 749 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 ZNF66Q6ZN08 573 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 KCTD9Q7L273 389 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 TMEM17Q86X19 198 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 OR5AU1Q8NGC0 362 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 CHPT1Q8WUD6 406 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 BORCS5Q969J3 196 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 HSPB9Q9BQS6 159 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 PRELID3BQ9Y3B1 194 aa15.94■□□□□ 0.14
HOXC6-204ENST00000509328 FABP12A6NFH5 140 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 TBPP20226 339 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 S100A5P33763 92 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 RPL30P62888 115 aaKnown RBP15.93■□□□□ 0.14
HOXC6-204ENST00000509328 PLGLAQ15195 96 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 VAX1Q5SQQ9 334 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 C11orf44Q8N8P7 122 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 SMIM4Q8WVI0 70 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 HARBI1Q96MB7 349 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 NOL4LQ96MY1 436 aaPredicted RBP15.93■□□□□ 0.14
HOXC6-204ENST00000509328 FBXL15Q9H469 300 aa15.93■□□□□ 0.14
HOXC6-204ENST00000509328 PLXNB1O43157 2135 aa15.92■□□□□ 0.14
HOXC6-204ENST00000509328 PSMB11A5LHX3 300 aa15.92■□□□□ 0.14
HOXC6-204ENST00000509328 CD28P10747 220 aa15.92■□□□□ 0.14
HOXC6-204ENST00000509328 RNASE10Q5GAN6 216 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms