RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 OR2Y1Q8NGV0 311 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 APOBEC4Q8WW27 367 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 DDB2Q92466 427 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 DLX4Q92988 240 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 OR2V2Q96R30 315 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 NIPSNAP3BQ9BS92 247 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GABARAPL1Q9H0R8 117 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 MRPS18BQ9Y676 258 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ATRXP46100 2492 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ADAMTS20P59510 1910 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 A8MXK9 166 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF814B7Z6K7 855 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ATP6V0E1O15342 81 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 DHHO43323 396 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 CD55P08174 381 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ELANEP08246 267 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 FOXA1P55317 472 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 CDSNQ15517 529 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 DNLZQ5SXM8 178 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF324BQ6AW86 544 aaPredicted RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LY6G5BQ8NDX9 201 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 GPR119Q8TDV5 335 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 SLC45A3Q96JT2 553 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 DPY30Q9C005 99 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 TVP23BQ9NYZ1 205 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 MYO18AQ92614 2054 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 CD300LBA8K4G0 201 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LOC730098B7Z3J9 87 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 EIF1BO60739 113 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 TNFSF13O75888 250 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LGALS3P17931 250 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 IMPA1P29218 277 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 SDC2P34741 201 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 EIF1P41567 113 aaKnown RBP3.28□□□□□ -1.88
NEDD4-209ENST00000508871 OR8G1Q15617 311 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 NPSR1Q6W5P4 371 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 LRRTM1Q86UE6 522 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 OR4A5Q8NH83 315 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 C11orf40Q8WZ69 217 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 RNF11Q9Y3C5 154 aa3.28□□□□□ -1.88
NEDD4-209ENST00000508871 CACNA1IQ9P0X4 2223 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TRAV8-3A0A0A6YYJ7 113 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 OR2H2O95918 312 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 HLA-DPB1P04440 258 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TPT1P13693 172 aaKnown RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ORMDL2Q53FV1 153 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TMEM255AQ5JRV8 349 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF343Q6P1L6 599 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF615Q8N8J6 731 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 SUMF1Q8NBK3 374 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 BMFQ96LC9 184 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TLNRD1Q9H1K6 362 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ABCG5Q9H222 651 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 F5H5P2 479 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ESDP10768 282 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 RND3P61587 244 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 RPL18AQ02543 176 aaKnown RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 NSUN5P1Q3KNT7 163 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 FAM182AQ5T1J6 154 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF613Q6PF04 617 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 Q6ZSV7 163 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 OR4D11Q8NGI4 311 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 OR51S1Q8NGJ8 323 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 YIPF5Q969M3 257 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TIMM17AQ99595 171 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 GPR84Q9NQS5 396 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TRBV5-3A0A0A0MS03 114 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ZNF354AO60765 605 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 SEMG1P04279 462 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 PSMB1P20618 241 aaKnown RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 OR1E2P47887 323 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 PSMB3P49720 205 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 HNRNPA3P51991 378 aaKnown RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 SRSF4Q08170 494 aaKnown RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 BPIFB6Q8NFQ5 453 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 GHSRQ92847 366 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 SDHCQ99643 169 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 SLC17A9Q9BYT1 436 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TMPRSS5Q9H3S3 457 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 DPM3Q9P2X0 92 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ST3GAL6Q9Y274 331 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 RNF115Q9Y4L5 304 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 C9orf118A6NHY6 69 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TNFRSF13BO14836 293 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 TNFP01375 233 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 GP1BBP13224 206 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 HOXB4P17483 251 aaPredicted RBP3.27□□□□□ -1.89
NEDD4-209ENST00000508871 GABRG2P18507 467 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 PPICP45877 212 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 RND2P52198 227 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 PGGT1BP53609 377 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 HLA-DRB3P79483 266 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 MXD1Q05195 221 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 OR1Q1Q15612 314 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 WFDC3Q8IUB2 231 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 FGF14Q92915 247 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 ST6GAL2Q96JF0 529 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
NEDD4-209ENST00000508871 CHCHD5Q9BSY4 110 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms