RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
CLDND1-219ENST00000508659 ZNF580Q9UK33 172 aa13.34□□□□□ -0.27
CLDND1-219ENST00000508659 GAB2Q9UQC2 676 aa13.34□□□□□ -0.27
CLDND1-219ENST00000508659 OR2W1Q9Y3N9 320 aa13.34□□□□□ -0.27
CLDND1-219ENST00000508659 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 NUDT19A8MXV4 375 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 LINC00205P59089 165 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
CLDND1-219ENST00000508659 RPL23AP62750 156 aaKnown RBP13.33□□□□□ -0.28
CLDND1-219ENST00000508659 TAGLNQ01995 201 aaKnown RBP13.33□□□□□ -0.28
CLDND1-219ENST00000508659 CXorf66Q5JRM2 361 aaPredicted RBP13.33□□□□□ -0.28
CLDND1-219ENST00000508659 FLYWCH2Q96CP2 140 aaKnown RBP13.33□□□□□ -0.28
CLDND1-219ENST00000508659 C5orf30Q96GV9 206 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 ADTRPQ96IZ2 230 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 HARBI1Q96MB7 349 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 NECAP2Q9NVZ3 263 aa13.33□□□□□ -0.28
CLDND1-219ENST00000508659 METTL1Q9UBP6 276 aaKnown RBP13.33□□□□□ -0.28
CLDND1-219ENST00000508659 MEIS3P1A6NDR6 274 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
CLDND1-219ENST00000508659 FCER2P06734 321 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 ALDH3B2P48448 385 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 CFHR3Q02985 330 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 FOXE3Q13461 319 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 PSG5Q15238 335 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 ABHD5Q8WTS1 349 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 VWFP04275 2813 aa13.32□□□□□ -0.28
CLDND1-219ENST00000508659 WNK1Q9H4A3 2382 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 SMIM31A0A1B0GVY4 71 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 SLC25A17O43808 307 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 SLC22A5O76082 557 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 HLA-DQB1P01920 261 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 APOA1P02647 267 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 ELANEP08246 267 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 RRASP10301 218 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 DUTP33316 252 aaKnown RBP13.31□□□□□ -0.28
CLDND1-219ENST00000508659 NDPQ00604 133 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 ECSCRQ19T08 205 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 MZT2AQ6P582 158 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 KCTD9Q7L273 389 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 KLHL30-AS1Q8NEE0 82 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 SNAPC3Q92966 411 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 CMTM3Q96MX0 182 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 ZFP57Q9NU63 452 aa13.31□□□□□ -0.28
CLDND1-219ENST00000508659 TRAV41A0A0B4J266 112 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 IGKV1D-13A0A0B4J2D9 117 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 SHOXO15266 292 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 TUSC2O75896 110 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 CA2P00918 260 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 IGHG4P01861 327 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 RPLP1P05386 114 aaKnown RBP13.3□□□□□ -0.28
CLDND1-219ENST00000508659 IGKV1-13P0DP09 117 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 SLC6A1P30531 599 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 FCGR2CP31995 323 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
CLDND1-219ENST00000508659 BVESQ8NE79 360 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 CLCC1Q96S66 551 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
CLDND1-219ENST00000508659 WSB1Q9Y6I7 421 aa13.3□□□□□ -0.28
CLDND1-219ENST00000508659 HPGDSO60760 199 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 NOL3O60936 208 aaKnown RBP13.29□□□□□ -0.28
CLDND1-219ENST00000508659 CD33P20138 364 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 AADACP22760 399 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 PRSS3P35030 304 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 LGALS7P47929 136 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 CX3CL1P78423 397 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 CDK10Q15131 360 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 C8orf86Q6ZUL3 223 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 C1QL4Q86Z23 238 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 CLVS1Q8IUQ0 354 aaPredicted RBP13.29□□□□□ -0.28
CLDND1-219ENST00000508659 OR5AP2Q8NGF4 316 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 RAB2BQ8WUD1 216 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 DDB2Q92466 427 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 RBMX2Q9Y388 322 aaKnown RBP13.29□□□□□ -0.28
CLDND1-219ENST00000508659 PRELID3BQ9Y3B1 194 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 A3GALT2U3KPV4 340 aa13.29□□□□□ -0.28
CLDND1-219ENST00000508659 LINC00473A8K010 186 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 FAM25AB3EWG3 89 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 FAM25CB3EWG5 89 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 FAM25GB3EWG6 89 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 G3V318 75 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 CRYZL1O95825 349 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 PPYP01298 95 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 ZNF182P17025 639 aaPredicted RBP13.28□□□□□ -0.28
CLDND1-219ENST00000508659 ELK1P19419 428 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 DEFA6Q01524 100 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 TMEM177Q53S58 311 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 LCNL1Q6ZST4 164 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 SNX29P2Q8IUI4 249 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 ZNF695Q8IW36 515 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 TCTEX1D1Q8N7M0 179 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 RNF152Q8N8N0 203 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 SECTM1Q8WVN6 248 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 TCTEX1D2Q8WW35 142 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 EHFQ9NZC4 300 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 ANAPC10Q9UM13 185 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 MEGF8Q7Z7M0 2845 aa13.28□□□□□ -0.28
CLDND1-219ENST00000508659 G3V4G9 280 aa13.27□□□□□ -0.29
CLDND1-219ENST00000508659 IGLV2-14P01704 120 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms