RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 RAB31Q13636 194 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 GABRA6Q16445 453 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF585BQ52M93 769 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 CST9LP1Q5W188 147 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 Q6P435 159 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ACSM6Q6P461 480 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 WDR73Q6P4I2 378 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 UNQ6494/PRO21346Q6UXR6 183 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 SSX7Q7RTT5 188 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM144Q7Z5S9 345 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 LINC01551Q86U37 167 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 MCEMP1Q8IX19 187 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 DRAM1Q8N682 238 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 CPEB3Q8NE35 698 aaKnown RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR4B1Q8NGF8 309 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 FGFBP3Q8TAT2 258 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 APH1AQ96BI3 265 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 SFRP2Q96HF1 295 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 POM121L2Q96KW2 1035 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 RBM14Q96PK6 669 aaKnown RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 UHRF2Q96PU4 802 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 HSD17B10Q99714 261 aaKnown RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM173AQ9BQD7 235 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 MIEN1Q9BRT3 115 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 IER2Q9BTL4 223 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 VAMP8Q9BV40 100 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 PHF7Q9BWX1 381 aaPredicted RBP4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 PRRG4Q9BZD6 226 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZDHHC11Q9H8X9 412 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OCIAD1Q9NX40 245 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR1A1Q9P1Q5 309 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 WDR83OSQ9Y284 106 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ARL2-SNX15V9GYD0 113 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 CEP350Q5VT06 3117 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 PCDH15Q96QU1 1955 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 ARID1AO14497 2285 aa4.18□□□□□ -1.74
HMGB3P16-201ENST00000508037 FER1L5A0AVI2 2057 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 KIAA0100Q14667 2235 aaKnown RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNRC6BQ9UPQ9 1833 aaKnown RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 C9JCJ5 164 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 G3V3Y1 287 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 RBMXL2O75526 392 aaKnown RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 NXPH2O95156 264 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR2H2O95918 312 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 IL18BPO95998 194 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 HPRT1P00492 218 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGKV1D-33P01593 117 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGKV1-33P01594 117 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 IGLV2-14P01704 120 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 CELA2AP08217 269 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SNRPCP09234 159 aaKnown RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR4A8P0C604 315 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 P0C879 139 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SFTPCP11686 197 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 MYF5P13349 255 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 CRISP2P16562 243 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF25P17030 456 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 MDKP21741 143 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 CD1BP29016 333 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 CHRNA7P36544 502 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 MPLP40238 635 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 KIR2DS2P43631 304 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 CXCL12P48061 93 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 GFRA1P56159 465 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ERVK-16P61578 105 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 TGFBR3Q03167 851 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 MZT1Q08AG7 82 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 Q0VG73 95 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF146Q15072 292 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 RTL8BQ17RB0 113 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 TBC1D28Q2M2D7 210 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 PDLIM3Q53GG5 364 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 WIPI1Q5MNZ9 446 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 LYSMD4Q5XG99 296 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SLC35E4Q6ICL7 350 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF705AQ6ZN79 300 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 TEX43Q6ZNM6 134 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 C5orf24Q7Z6I8 188 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR5AU1Q8NGC0 362 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR1K1Q8NGR3 316 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR52E5Q8NH55 327 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SGMS2Q8NHU3 365 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SAP25Q8TEE9 199 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ABHD3Q8WU67 409 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 CORO2AQ92828 525 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 TBX15Q96SF7 602 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 GPHA2Q96T91 129 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ELOVL1Q9BW60 279 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SNHG12Q9BXW3 62 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 FGF23Q9GZV9 251 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR51B6Q9H340 312 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF552Q9H707 407 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF703Q9H7S9 590 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 GP6Q9HCN6 339 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 RAB9BQ9NP90 201 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 PARD6AQ9NPB6 346 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms