RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 CNN1P51911 297 aaKnown RBP11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 ZXDAP98168 799 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 TMEM256Q8N2U0 113 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 OR10P1Q8NGE3 313 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 OR52L2PQ8NGH6 319 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 MRPL37Q9BZE1 423 aaKnown RBP11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF703Q9H7S9 590 aaPredicted RBP11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 CBLN4Q9NTU7 201 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 BOKQ9UMX3 212 aaPredicted RBP11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 RNF212BA8MTL3 300 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 CDIPTO14735 213 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 SYNGR4O95473 234 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 MBP02144 154 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 C1QTNF9P0C862 333 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 OR3A1P47881 315 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 RPL15P61313 204 aaKnown RBP11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 GNB1P62873 340 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 ATP6V1FQ16864 119 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 LINC01551Q86U37 167 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF645Q8N7E2 425 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF114Q8NC26 417 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 OR2M7Q8NG81 312 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 DTD1Q8TEA8 209 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 WDYHV1Q96HA8 205 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 SNHG12Q9BXW3 62 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 C12orf49Q9H741 205 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 A0A0U1RQK1 487 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 MLNRO43193 412 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 VENTXO95231 258 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 MAGEA5P43359 124 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 WIPI2Q9Y4P8 454 aa11.26□□□□□ -0.61
SNCAIP-209ENST00000508017 TRAV38-1A0A0B4J264 116 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 NEURL1O76050 574 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 NXPH2O95156 264 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 TFF1P04155 84 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 CDC34P49427 236 aaPredicted RBP11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 MSMO1Q15800 293 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 IQCJQ1A5X6 159 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 KCNIP4Q6PIL6 250 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 TMPRSS7Q7RTY8 843 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 TIPARPQ7Z3E1 657 aaKnown RBP11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 MDP1Q86V88 176 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 Q8N7P7 452 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF709Q8N972 641 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 CT55Q8WUE5 264 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 THOC3Q96J01 351 aaKnown RBP11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 AHCTF1Q8WYP5 2266 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 PSPNO60542 156 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 SERPINA7P05543 415 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 CCKARP32238 428 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 EIF4EBP1Q13541 118 aaPredicted RBP11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 PMS2CLQ68D20 193 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 TCF23Q7RTU1 214 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 RTL8AQ9BWD3 113 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 FKBP11Q9NYL4 201 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 POLR3KQ9Y2Y1 108 aaPredicted RBP11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 TRAPPC1Q9Y5R8 145 aa11.25□□□□□ -0.61
SNCAIP-209ENST00000508017 URB1O60287 2271 aaKnown RBP11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 RBMXL2O75526 392 aaKnown RBP11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 NDUFB4O95168 129 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 PDGFBP01127 241 aaPredicted RBP11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 IGHEP01854 428 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 CELA3BP08861 270 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 GCH1P30793 250 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 PPP1CBP62140 327 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 TRA2AQ13595 282 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 TMEM144Q7Z5S9 345 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 G0S2P27469 103 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 CD82P27701 267 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 CASP6P55212 293 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 VWC2Q2TAL6 325 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 TMEM204Q9BSN7 226 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
SNCAIP-209ENST00000508017 SH2D1BO14796 132 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 GRPP07492 148 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 RAC2P15153 192 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 CD33P20138 364 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 LCN2P80188 198 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 FAM173AQ9BQD7 235 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 WNT9BO14905 357 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 HAND1O96004 215 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 HNF1AP20823 631 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 EDDM3BP56851 147 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 RAB4BP61018 213 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 AESQ08117 197 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 ZNF146Q15072 292 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 LRP11Q86VZ4 500 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 GALMQ96C23 342 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 PXMP4Q9Y6I8 212 aa11.23□□□□□ -0.61
SNCAIP-209ENST00000508017 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms