RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TBC1D26Q86UD7 250 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 CAPSLQ8WWF8 208 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 DDB2Q92466 427 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 CFHR4Q92496 578 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 HSD17B10Q99714 261 aaKnown RBP11.43□□□□□ -0.58
RNF4-208ENST00000507247 BEX2Q9BXY8 128 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 BEX1Q9HBH7 125 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 MTORP42345 2549 aa11.43□□□□□ -0.58
RNF4-208ENST00000507247 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 MPPED1O15442 326 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 TXNL1O43396 289 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 AKR1C4P17516 323 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 HNF1AP20823 631 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 SRP14P37108 136 aaKnown RBP11.42□□□□□ -0.58
RNF4-208ENST00000507247 THBS3P49746 956 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 BRWD1-AS2P59051 145 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 FBLN7Q53RD9 439 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 OR2B11Q5JQS5 317 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 PLET1Q6UQ28 207 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 KCTD9Q7L273 389 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 MOB3BQ86TA1 216 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 SLC25A42Q86VD7 318 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 OR8H3Q8N146 312 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 CCDC71LQ8N9Z2 235 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 TCTEX1D2Q8WW35 142 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 ZNF48Q96MX3 618 aaPredicted RBP11.42□□□□□ -0.58
RNF4-208ENST00000507247 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 MEGF9Q9H1U4 602 aa11.42□□□□□ -0.58
RNF4-208ENST00000507247 H0YJW9 148 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 FBP1P09467 338 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 F2RP25116 425 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 MECP2P51608 486 aaKnown RBP11.41□□□□□ -0.58
RNF4-208ENST00000507247 SUPT4H1P63272 117 aaKnown RBP11.41□□□□□ -0.58
RNF4-208ENST00000507247 DHODHQ02127 395 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 CATR1Q13166 79 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 PPP1R1AQ13522 171 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 HABP2Q14520 560 aaPredicted RBP11.41□□□□□ -0.58
RNF4-208ENST00000507247 TUSC1Q2TAM9 212 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 CHPT1Q8WUD6 406 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 ADTRPQ96IZ2 230 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 TP53RKQ96S44 253 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 NAA60Q9H7X0 242 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 FAM96BQ9Y3D0 163 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
RNF4-208ENST00000507247 TEX13DA0A0J9YY54 714 aaPredicted RBP11.4□□□□□ -0.58
RNF4-208ENST00000507247 INMT-MINDY4F8WBC2 141 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 PEX14O75381 377 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 OR5AC1P0C628 307 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 CD24P25063 80 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 S100GP29377 79 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 RAB13P51153 203 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 TAS2R31P59538 309 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 TRIM16LQ309B1 348 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 SP6Q3SY56 376 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 TMEM128Q5BJH2 165 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 ALX4Q9H161 411 aaPredicted RBP11.4□□□□□ -0.58
RNF4-208ENST00000507247 SLC35D1Q9NTN3 355 aa11.4□□□□□ -0.58
RNF4-208ENST00000507247 A0A0B4J293 547 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 C3orf85A0A1B0GTC6 90 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 RNF212BA8MTL3 300 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 VGLL3A8MV65 326 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 H0Y980 276 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 RAMP3O60896 148 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 FCGR3BO75015 233 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 VENTXO95231 258 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 OR4E1P0C645 316 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 UBE2MP61081 183 aaKnown RBP11.39□□□□□ -0.59
RNF4-208ENST00000507247 SLC9A3R2Q15599 337 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 ZNF585BQ52M93 769 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 SGPP2Q8IWX5 399 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 SPAG16Q8N0X2 631 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 PIFOQ8TCI5 191 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 GALNT14Q96FL9 552 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 SEC22CQ9BRL7 303 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 LIN7CQ9NUP9 197 aaKnown RBP11.39□□□□□ -0.59
RNF4-208ENST00000507247 PRR13Q9NZ81 148 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 CDC42EP3Q9UKI2 254 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 PRELID3BQ9Y3B1 194 aa11.39□□□□□ -0.59
RNF4-208ENST00000507247 SFT2D2O95562 160 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 APOA2P02652 100 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 SNRNP70P08621 437 aaKnown RBP11.38□□□□□ -0.59
RNF4-208ENST00000507247 SRD5A1P18405 259 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 VAMP1P23763 118 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 CD1BP29016 333 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 KIR2DS2P43631 304 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 DYNLT3P51808 116 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 RAG2P55895 527 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 DHRS2Q13268 280 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 TMEM187Q14656 261 aa11.38□□□□□ -0.59
RNF4-208ENST00000507247 LRRC75BQ2VPJ9 315 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms