RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 M0R1X1 148 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 BRI3O95415 125 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 CA2P00918 260 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 HSPB1P04792 205 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 OR8U9P0C7N5 309 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 RAB3BP20337 219 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 TALDO1P37837 337 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 GABARAPL2P60520 117 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 GNB1P62873 340 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 SSX1Q16384 188 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 RTL8BQ17RB0 113 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 HES5Q5TA89 166 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 C11orf87Q6NUJ2 197 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 IZUMO2Q6UXV1 221 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 Q6ZS49 121 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 ZNF383Q8NA42 475 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 DCUN1D4Q92564 292 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 CYYR1Q96J86 154 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 PARP12Q9H0J9 701 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
HMGCS1-203ENST00000507004 MFNGO00587 321 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 SOX15O60248 233 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 PROP1O75360 226 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 FCGR3AP08637 254 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 CTXN2P0C2S0 81 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 HIST1H1DP16402 221 aaKnown RBP11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 ZP3P21754 424 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 MAP2K4P45985 399 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 TPPP2P59282 170 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 PITPNAQ00169 270 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 FXYD3Q14802 87 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 LFNGQ8NES3 379 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 FCGR1BQ92637 280 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 RHOVQ96L33 236 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 CNBD2Q96M20 576 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 OR4C12Q96R67 309 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 PRR25Q96S07 402 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 GINS4Q9BRT9 223 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 Q9H521 79 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 FBXO7Q9Y3I1 522 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 A3GALT2U3KPV4 340 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 U3KQK5 164 aa11.17□□□□□ -0.62
HMGCS1-203ENST00000507004 IGKV1-6A0A0C4DH72 117 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 RAB27BO00194 218 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 FCN1O00602 326 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 BET1O15155 118 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 SAP30O75446 220 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 SLC22A5O76082 557 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 CNIH1O95406 144 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 LY86O95711 162 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 EGR2P11161 476 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 AADACP22760 399 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 DTYMKP23919 212 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 ARFRP1Q13795 201 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 POC5Q8NA72 575 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 DRAXINQ8NBI3 349 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 RANGRFQ9HD47 186 aaPredicted RBP11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
HMGCS1-203ENST00000507004 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 SLC25A17O43808 307 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 TRGV3P03979 118 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 FGF9P31371 208 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 VMA21Q3ZAQ7 101 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 TMEM177Q53S58 311 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 ACSM6Q6P461 480 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 TPRA1Q86W33 373 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 DLX4Q92988 240 aaPredicted RBP11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 RBMXL1Q96E39 390 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 CLCC1Q96S66 551 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 YTHDF1Q9BYJ9 559 aaKnown RBP11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 DCSTAMPQ9H295 470 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 SDHAF2Q9NX18 166 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 KCNK7Q9Y2U2 307 aa11.15□□□□□ -0.62
HMGCS1-203ENST00000507004 NOTOA8MTQ0 251 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 SHOXO15266 292 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 GSTT2BP0CG30 244 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 GNB3P16520 340 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 TEX45Q8NA69 505 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 OSR1Q8TAX0 266 aaPredicted RBP11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 ZNF355PQ9NSJ1 428 aa11.14□□□□□ -0.63
HMGCS1-203ENST00000507004 IGHV4OR15-8A0A075B7B6 117 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 A0A087WW49 117 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 CRYGBP07316 175 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 SLURP1P55000 103 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 SCAND1P57086 179 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms