RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 HACD4Q5VWC8 232 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 TGIF2LXQ8IUE1 241 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 CROCCP3Q8IVE0 287 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 ODF3L1Q8IXM7 274 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 C8orf31Q8N9H6 132 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 OR4C13Q8NGP0 309 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 ST6GALNAC6Q969X2 333 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 ABHD14BQ96IU4 210 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 SLC25A33Q9BSK2 321 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 NPFFR1Q9GZQ6 430 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 RAB18Q9NP72 206 aa7.55□□□□□ -1.2
CLCN3-205ENST00000506924 SAA2-SAA4A0A096LPE2 208 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 HPGDSO60760 199 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 TSPAN9O75954 239 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 FAM106CPP0CH98 169 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 SAA2P0DJI9 122 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 TMEM11P17152 192 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 RPL5P46777 297 aaKnown RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 RORCP51449 518 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 RPL15P61313 204 aaKnown RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 ZNF816Q0VGE8 651 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 TMEM95Q3KNT9 176 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 Q3ZCU0 254 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 C9orf152Q5JTZ5 239 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 UBE2NLQ5JXB2 153 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 OR8H3Q8N146 312 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 GVQW1Q8N7I0 195 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 OR4A4PQ8NGN8 299 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 S100A16Q96FQ6 103 aaKnown RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 RBM14Q96PK6 669 aaKnown RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 MRPL20Q9BYC9 149 aaKnown RBP7.54□□□□□ -1.2
CLCN3-205ENST00000506924 IFI27L2Q9H2X8 130 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 C16orf95Q9H693 158 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 ZNF702PQ9H963 129 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 DIABLOQ9NR28 239 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 RDH8Q9NYR8 311 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 MGAT4AQ9UM21 535 aa7.54□□□□□ -1.2
CLCN3-205ENST00000506924 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 MPPED1O15442 326 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 LANCL1O43813 399 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 SCGNO76038 276 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 OR2F2O95006 317 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 DTYMKP23919 212 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 KIR2DS4P43632 304 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 PROK1P58294 105 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 LINC00205P59089 165 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 TAS2R20P59543 309 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 KIR2DS1Q14954 304 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 ARL6IP1Q15041 203 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 ABCA11PQ4W5N1 156 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 GLDNQ6ZMI3 551 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-205ENST00000506924 Q6ZNX1 250 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 C11orf44Q8N8P7 122 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 DRAXINQ8NBI3 349 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-205ENST00000506924 OR10J5Q8NHC4 309 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 OR2T6Q8NHC8 308 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 GINS4Q9BRT9 223 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 KRTAP4-2Q9BYR5 136 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 ABCG5Q9H222 651 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 AUNIPQ9H7T9 357 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLCN3-205ENST00000506924 MRPS7Q9Y2R9 242 aaKnown RBP7.53□□□□□ -1.2
CLCN3-205ENST00000506924 MMP24Q9Y5R2 645 aa7.53□□□□□ -1.2
CLCN3-205ENST00000506924 TRBV6-7A0A0A0MS04 114 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 A0A1B0GUS0 222 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 NCBP2LA6PVI3 153 aaKnown RBP7.52□□□□□ -1.21
CLCN3-205ENST00000506924 FAM25AB3EWG3 89 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 FAM25CB3EWG5 89 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 FAM25GB3EWG6 89 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 RAB29O14966 203 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 XRCC3O43542 346 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 OR8U9P0C7N5 309 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 ELK1P19419 428 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 NFYAP23511 347 aaPredicted RBP7.52□□□□□ -1.21
CLCN3-205ENST00000506924 GPR12P47775 334 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF137PP52743 207 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 RPS16P62249 146 aaKnown RBP7.52□□□□□ -1.21
CLCN3-205ENST00000506924 PITPNAQ00169 270 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 TMEM69Q5SWH9 247 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 LCE5AQ5TCM9 118 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF833PQ6ZTB9 187 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 KLHDC1Q8N7A1 406 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 OR8U1Q8NH10 309 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 SVIPQ8NHG7 77 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 RITA1Q96K30 269 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 NABP2Q9BQ15 211 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF251Q9BRH9 671 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 AIFM2Q9BRQ8 373 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 AGMATQ9BSE5 352 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 CABLES2Q9BTV7 478 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 PRSS22Q9GZN4 317 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 MOB4Q9Y3A3 225 aa7.52□□□□□ -1.21
CLCN3-205ENST00000506924 RBM7Q9Y580 266 aaKnown RBP7.52□□□□□ -1.21
CLCN3-205ENST00000506924 A0A0A6YYH2 397 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 CCDC160A6NGH7 325 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 A6NJ64 397 aa7.51□□□□□ -1.21
CLCN3-205ENST00000506924 PROP1O75360 226 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms