RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 TNFRSF9Q07011 255 aa18.35■□□□□ 0.53
RNF4-207ENST00000506706 TMEM30BQ3MIR4 351 aa18.35■□□□□ 0.53
RNF4-207ENST00000506706 SLC25A10Q9UBX3 287 aaPredicted RBP18.35■□□□□ 0.53
RNF4-207ENST00000506706 CACFD1Q9UGQ2 172 aa18.35■□□□□ 0.53
RNF4-207ENST00000506706 STRAPQ9Y3F4 350 aaKnown RBP18.35■□□□□ 0.53
RNF4-207ENST00000506706 SLC31A2O15432 143 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 ATP6V0CP27449 155 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 GRNP28799 593 aaKnown RBP18.34■□□□□ 0.53
RNF4-207ENST00000506706 RPL39P5Q59GN2 51 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 USF3Q68DE3 2245 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 SFTPCP11686 197 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 CAMLGP49069 296 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 LYPD6BQ8NI32 183 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 LEAP2Q969E1 77 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 RBKSQ9H477 322 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 PRORYQ9H606 182 aa18.34■□□□□ 0.53
RNF4-207ENST00000506706 CISD1Q9NZ45 108 aaKnown RBP18.34■□□□□ 0.53
RNF4-207ENST00000506706 MARCH11A6NNE9 402 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 FCGR3BO75015 233 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 HPRT1P00492 218 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 PLAUP00749 431 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 APOC3P02656 99 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 PRH1P02810 166 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 NFYBP25208 207 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 AKR1C1Q04828 323 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 CT45A1Q5HYN5 189 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 UNQ6494/PRO21346Q6UXR6 183 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 TMEM182Q6ZP80 229 aaPredicted RBP18.33■□□□□ 0.52
RNF4-207ENST00000506706 CT45A3Q8NHU0 189 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 PRELID3BQ9Y3B1 194 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 LINC00312Q9Y6C7 94 aa18.33■□□□□ 0.52
RNF4-207ENST00000506706 TMEM218A2RU14 115 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 UTF1Q5T230 341 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.32■□□□□ 0.52
RNF4-207ENST00000506706 OR2G3Q8NGZ4 309 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 CA5BP1Q8WTZ4 195 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 R3HDM4Q96D70 268 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 GNPNAT1Q96EK6 184 aaPredicted RBP18.32■□□□□ 0.52
RNF4-207ENST00000506706 TSNAXQ99598 290 aaKnown RBP18.32■□□□□ 0.52
RNF4-207ENST00000506706 TRIM77I1YAP6 450 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 KIR2DS2P43631 304 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 ID4P47928 161 aa18.32■□□□□ 0.52
RNF4-207ENST00000506706 SRSF3P84103 164 aaKnown RBP18.32■□□□□ 0.52
RNF4-207ENST00000506706 MEF2CQ06413 473 aaPredicted RBP18.32■□□□□ 0.52
RNF4-207ENST00000506706 RBFOX2O43251 390 aaKnown RBP eCLIP18.31■□□□□ 0.52
RNF4-207ENST00000506706 METTL15P1P0C7V9 234 aa18.31■□□□□ 0.52
RNF4-207ENST00000506706 ZNF616Q08AN1 781 aa18.31■□□□□ 0.52
RNF4-207ENST00000506706 SPANXN5Q5MJ07 72 aa18.31■□□□□ 0.52
RNF4-207ENST00000506706 S1PR3Q99500 378 aa18.31■□□□□ 0.52
RNF4-207ENST00000506706 TREM1Q9NP99 234 aa18.31■□□□□ 0.52
RNF4-207ENST00000506706 C19orf12Q9NSK7 152 aa18.31■□□□□ 0.52
RNF4-207ENST00000506706 DIDO1Q9BTC0 2240 aaKnown RBP18.31■□□□□ 0.52
RNF4-207ENST00000506706 A0A1W2PPE3 182 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 UMAD1C9J7I0 102 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 IFNA5P01569 189 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 HBG1P69891 147 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 HBG2P69892 147 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 ZNF439Q8NDP4 499 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 GAL3ST2Q9H3Q3 398 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 TNFRSF13BO14836 293 aaPredicted RBP18.3■□□□□ 0.52
RNF4-207ENST00000506706 RBMXL2O75526 392 aaKnown RBP18.3■□□□□ 0.52
RNF4-207ENST00000506706 TSPAN15O95858 294 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 FHITP49789 147 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 RPL31P62899 125 aaKnown RBP18.3■□□□□ 0.52
RNF4-207ENST00000506706 LY6DQ14210 128 aa18.3■□□□□ 0.52
RNF4-207ENST00000506706 RPUSD1Q9UJJ7 312 aaKnown RBP18.3■□□□□ 0.52
RNF4-207ENST00000506706 SAA2-SAA4A0A096LPE2 208 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 C1QL1O75973 258 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 SAA2P0DJI9 122 aaPredicted RBP18.29■□□□□ 0.52
RNF4-207ENST00000506706 CDSNQ15517 529 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 PRAMEF5Q5TYX0 476 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 OR10A7Q8NGE5 316 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 TMEM231Q9H6L2 316 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 IGHV1-69-2A0A0G2JMI3 117 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 FAM90A9PA6NNJ1 464 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 AGPAT2O15120 278 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 MMP23AO75900 390 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 M6PRP20645 277 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 SLC25A24Q6NUK1 477 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 LYG1Q8N1E2 194 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 DDB2Q92466 427 aa18.29■□□□□ 0.52
RNF4-207ENST00000506706 MS4A7Q9GZW8 240 aaPredicted RBP18.29■□□□□ 0.52
RNF4-207ENST00000506706 SIAH2O43255 324 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 NDUFB3O43676 98 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 MRPS11P82912 194 aaKnown RBP18.28■□□□□ 0.52
RNF4-207ENST00000506706 DEFA5Q01523 94 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 ZNF273Q14593 569 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 LRRC10Q5BKY1 277 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 TMEM14EPQ6UXP3 125 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 C1orf229Q6ZS94 237 aaPredicted RBP18.28■□□□□ 0.52
RNF4-207ENST00000506706 MUC15Q8N387 334 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 COMMD1Q8N668 190 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 FAM213BQ8TBF2 198 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 UQCC1Q9NVA1 299 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 RFNGQ9Y644 331 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 SPTA1P02549 2419 aa18.28■□□□□ 0.52
RNF4-207ENST00000506706 THBS3P49746 956 aa18.27■□□□□ 0.52
RNF4-207ENST00000506706 GNG10P50151 68 aa18.27■□□□□ 0.52
RNF4-207ENST00000506706 ARHGDIBP52566 201 aa18.27■□□□□ 0.52
RNF4-207ENST00000506706 RUNX1Q01196 453 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms