RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF491Q8N8L2 437 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 DRAXINQ8NBI3 349 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 Q9H521 79 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 GNB4Q9HAV0 340 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF221Q9UK13 617 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 RNF150Q9ULK6 438 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 STUB1Q9UNE7 303 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 GAB2Q9UQC2 676 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 NUBP2Q9Y5Y2 271 aa7.06□□□□□ -1.28
PDLIM5-209ENST00000506632 METTL21EPA6NDL7 271 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 H7C2Y5 167 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 SPDEFO95238 335 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 RAB9AP51151 201 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 PSG5Q15238 335 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF773Q6PK81 442 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF562Q6V9R5 426 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 TPRA1Q86W33 373 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 PDPNQ86YL7 162 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 TCTEX1D1Q8N7M0 179 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 OR5M8Q8NGP6 311 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 DPF1Q92782 380 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 C5orf30Q96GV9 206 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 TSNAXQ99598 290 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 SDHAF2Q9NX18 166 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF230Q9UIE0 474 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 ELF5Q9UKW6 265 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 VSIG4Q9Y279 399 aa7.05□□□□□ -1.28
PDLIM5-209ENST00000506632 A0A075B6Q4 140 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 IGKV1D-8A0A087WSZ0 117 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 SMIM30A4D0T7 59 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 M0R1X1 148 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 BET1O15155 118 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 APOA2P02652 100 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 OR8U9P0C7N5 309 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 DTYMKP23919 212 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 LUMP51884 338 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 GNB1P62873 340 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 SSBP2P81877 361 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 MRPS15P82914 257 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 ARL6IP1Q15041 203 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 ECSCRQ19T08 205 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 AKIRIN2Q53H80 203 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 SFXN4Q6P4A7 337 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 TMEM65Q6PI78 240 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 H1FOOQ8IZA3 346 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 OR11H1Q8NG94 326 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 OR10J5Q8NHC4 309 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 MAFIPQ8WZ33 124 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 CENPOQ9BU64 300 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 ATG5Q9H1Y0 275 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 OR2D2Q9H210 308 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 OR51E2Q9H255 320 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 TPSG1Q9NRR2 321 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 SLC35D1Q9NTN3 355 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 METTL1Q9UBP6 276 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 SSR3Q9UNL2 185 aa7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 FOXA2Q9Y261 457 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-209ENST00000506632 A0A1W2PN81 502 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 CA2P00918 260 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 CRYGBP07316 175 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 OR8U8P0C7N1 319 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 SDC2P34741 201 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 CHRNA7P36544 502 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 RAB25P57735 213 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 RPS16P62249 146 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF616Q08AN1 781 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 ARFRP1Q13795 201 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 PLGLAQ15195 96 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 ZNF260Q3ZCT1 412 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 CDNFQ49AH0 187 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 KCTD21Q4G0X4 260 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 C9orf66Q5T8R8 295 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 HACD4Q5VWC8 232 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 PPP1R27Q86WC6 154 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 OR1N2Q8NGR9 330 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 LGALS14Q8TCE9 139 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 DDB2Q92466 427 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 FLYWCH2Q96CP2 140 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 FAM103A1Q9BTL3 118 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 ZMAT5Q9UDW3 170 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 DAPK2Q9UIK4 370 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 SCOCQ9UIL1 159 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 TNCP24821 2201 aa7.03□□□□□ -1.28
PDLIM5-209ENST00000506632 TMEM235A6NFC5 223 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 SEC14L6B5MCN3 397 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 ARPC1BO15143 372 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 SLC25A17O43808 307 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 RAMP3O60896 148 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 SCGNO76038 276 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 CLEC2LP0C7M8 214 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 DUTP33316 252 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 TALDO1P37837 337 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 LGALS7P47929 136 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 SCAND1P57086 179 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 DGCR2P98153 550 aa7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 TMEM267Q0VDI3 215 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-209ENST00000506632 MRGPRG-AS1Q2M3A8 158 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms