RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, human

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42SE2-209	ENST00000506419	PDCD5	O14737	125 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	BET1	O15155	118 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	CA2	P00918	260 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	IGLV2-23	P01705	113 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	TFAP2A	P05549	437 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	CRYGB	P07316	175 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	FCGR3A	P08637	254 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	OR8U8	P0C7N1	319 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	OR8U9	P0C7N5	309 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SLURP1	P55000	103 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	PJVK	Q0ZLH3	352 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	AKIRIN2	Q53H80	203 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	RHOV	Q96L33	236 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	VCX3B	Q9H321	246 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	NDUFB11	Q9NX14	153 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SDHAF2	Q9NX18	166 aa		11.12	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SRRM4	A7MD48	611 aa	Known RBP	11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	IGHV3-11	P01762	117 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	RAB3B	P20337	219 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	HSPA13	P48723	471 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	ACTBL2	Q562R1	376 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	C22orf42	Q6IC83	251 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	UNQ5815/PRO19632	Q6UWF5	114 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	TCTEX1D1	Q8N7M0	179 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	ABHD5	Q8WTS1	349 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	FLYWCH2	Q96CP2	140 aa	Known RBP	11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	TSNAX	Q99598	290 aa	Known RBP	11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	CABLES2	Q9BTV7	478 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	RAB26	Q9ULW5	256 aa		11.11	□□□□□ -0.63
CDC42SE2-209	ENST00000506419		A0A075B6Q4	140 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	IGHV4OR15-8	A0A075B7B6	117 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419		A0A087WW49	117 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SMIM30	A4D0T7	59 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	ERICH4	A6NGS2	130 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	LINC01619	G3V211	115 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	OVOL1	O14753	267 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SLC25A17	O43808	307 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	LGALS1	P09382	135 aa	Known RBP	11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	HIST1H1D	P16402	221 aa	Known RBP	11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	RAB6A	P20340	208 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SERPINB10	P48595	397 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	FXYD3	Q14802	87 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	MRGPRG-AS1	Q2M3A8	158 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	PDPN	Q86YL7	162 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SPART	Q8N0X7	666 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	OR5T1	Q8NG75	326 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	ASCL2	Q99929	193 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SLC35D1	Q9NTN3	355 aa		11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.1	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SACS	Q9NZJ4	4579 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	SPDEF	O95238	335 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	RANBP1	P43487	201 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	INSL3	P51460	131 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	CDNF	Q49AH0	187 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	UBE2U	Q5VVX9	321 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	BVES	Q8NE79	360 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	OR10J5	Q8NHC4	309 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	OR2D2	Q9H210	308 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	BLOC1S6	Q9UL45	172 aa		11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.09	□□□□□ -0.63
CDC42SE2-209	ENST00000506419	APOA2	P02652	100 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	HSPB1	P04792	205 aa	Known RBP	11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	NHLRC4	P0CG21	123 aa	Predicted RBP	11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	GAL	P22466	123 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	MYL9	P24844	172 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	LGALS7	P47929	136 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	MRPS15	P82914	257 aa	Known RBP	11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	DCTN2	Q13561	401 aa	Known RBP	11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419		Q6ZS49	121 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	ZNF429	Q86V71	674 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	GRPEL2	Q8TAA5	225 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	ARPC1A	Q92747	370 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	ATG5	Q9H1Y0	275 aa		11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	TXNL4B	Q9NX01	149 aa	Known RBP	11.08	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	METTL21EP	A6NDL7	271 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419		J3QRK9	145 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	MRPS14	O60783	128 aa	Known RBP	11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	DIRAS3	O95661	229 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	ATP6V1G2	O95670	118 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	GADD45A	P24522	165 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	FGF9	P31371	208 aa	Predicted RBP	11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	TPPP2	P59282	170 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	GABARAPL2	P60520	117 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	TMEM177	Q53S58	311 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	PYHIN1	Q6K0P9	492 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	ACSM6	Q6P461	480 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	DDB2	Q92466	427 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	WWC2-AS2	Q96NR7	200 aa		11.07	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	LINC00473	A8K010	186 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	NOTO	A8MTQ0	251 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	SAP30	O75446	220 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	CNIH1	O95406	144 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	LY86	O95711	162 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	TRGV3	P03979	118 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	SPN	P16150	400 aa		11.06	□□□□□ -0.64
CDC42SE2-209	ENST00000506419	DUT	P33316	252 aa	Known RBP	11.06	□□□□□ -0.64

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