RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 BPIFB6Q8NFQ5 453 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 HARBI1Q96MB7 349 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 COA4Q9NYJ1 87 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 SIGLEC8Q9NYZ4 499 aa16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 RBM7Q9Y580 266 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-210ENST00000506042 TMEM14DPA8MWL7 114 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 EBAG9O00559 213 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 KLF5Q13887 457 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 TRAM1Q15629 374 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 CEACAM19Q7Z692 300 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 LAX1Q8IWV1 398 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 Q8N1Y9 231 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 DRAXINQ8NBI3 349 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 OR5T1Q8NG75 326 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 OR56B1Q8NGI3 324 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 NICN1Q9BSH3 213 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 EDA2RQ9HAV5 297 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 SLC2A8Q9NY64 477 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 SCN3BQ9NY72 215 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 AK3Q9UIJ7 227 aa16.11■□□□□ 0.17
SQSTM1-210ENST00000506042 SHISA3A0PJX4 238 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 SHOXO15266 292 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 ACTL6BO94805 426 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 IGKV1-16P04430 117 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 MAP2K4P45985 399 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 PSMD7P51665 324 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 SYNJ2BPP57105 145 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 VMA21Q3ZAQ7 101 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 OR4A4PQ8NGN8 299 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 OR10J5Q8NHC4 309 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 ADTRPQ96IZ2 230 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 TINAGL1Q9GZM7 467 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 Q9N2K0 584 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 OR1A1Q9P1Q5 309 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 NKX1-2Q9UD57 310 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 RYR3Q15413 4870 aa16.1■□□□□ 0.17
SQSTM1-210ENST00000506042 TRDCB7Z8K6 153 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 TUSC2O75896 110 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 TPPPO94811 219 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 CD3GP09693 182 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 PSMA1P25786 263 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 UNC119Q13432 240 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 C5orf24Q7Z6I8 188 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 LRRTM1Q86UE6 522 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 BVESQ8NE79 360 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 UFD1Q92890 307 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 RDH8Q9NYR8 311 aa16.09■□□□□ 0.17
SQSTM1-210ENST00000506042 DIRAS3O95661 229 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 GADD45AP24522 165 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 SPHARQ15513 63 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 MED22Q15528 200 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 RAB11BQ15907 218 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 HAGHQ16775 308 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 RNLSQ5VYX0 342 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 ZNF343Q6P1L6 599 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 HAPLN4Q86UW8 402 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 ZNF383Q8NA42 475 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 LPAR5Q9H1C0 372 aa16.08■□□□□ 0.16
SQSTM1-210ENST00000506042 FAM223BA6NKX1 122 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 SLC17A2O00624 439 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 SCTP09683 121 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 FAM223AQ8IWN6 122 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 FAM89BQ8N5H3 189 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 DYNLRB2Q8TF09 96 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 OR2D2Q9H210 308 aa16.07■□□□□ 0.16
SQSTM1-210ENST00000506042 SOCS1O15524 211 aa16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 UCHL1P09936 223 aa16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 P2RY14Q15391 338 aa16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 SLC25A42Q86VD7 318 aa16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 GINS4Q9BRT9 223 aa16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 PARP12Q9H0J9 701 aaKnown RBP16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 CEPT1Q9Y6K0 416 aa16.06■□□□□ 0.16
SQSTM1-210ENST00000506042 BET1O15155 118 aa16.05■□□□□ 0.16
SQSTM1-210ENST00000506042 CDK1P06493 297 aa16.05■□□□□ 0.16
SQSTM1-210ENST00000506042 OR9G9P0C7N8 305 aa16.05■□□□□ 0.16
SQSTM1-210ENST00000506042 QRFPP83859 136 aa16.05■□□□□ 0.16
SQSTM1-210ENST00000506042 SPIN2AQ99865 258 aa16.05■□□□□ 0.16
SQSTM1-210ENST00000506042 SPIN2BQ9BPZ2 258 aa16.05■□□□□ 0.16
SQSTM1-210ENST00000506042 FABP7O15540 132 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 CD81P60033 236 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 ARL6IP1Q15041 203 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 TNXAQ16473 311 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 TMEM177Q53S58 311 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 TEX45Q8NA69 505 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 ACOT12Q8WYK0 555 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 KCTD12Q96CX2 325 aaKnown RBP16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 ARHGAP5-AS1Q96IT6 56 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 HDHD3Q9BSH5 251 aaPredicted RBP16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 PECRQ9BY49 303 aa16.04■□□□□ 0.16
SQSTM1-210ENST00000506042 PTGES3LE9PB15 166 aa16.03■□□□□ 0.16
SQSTM1-210ENST00000506042 DENRO43583 198 aaKnown RBP16.03■□□□□ 0.16
SQSTM1-210ENST00000506042 TALDO1P37837 337 aa16.03■□□□□ 0.16
SQSTM1-210ENST00000506042 ATP5G2Q06055 141 aa16.03■□□□□ 0.16
SQSTM1-210ENST00000506042 SSX1Q16384 188 aa16.03■□□□□ 0.16
SQSTM1-210ENST00000506042 OSR1Q8TAX0 266 aaPredicted RBP16.03■□□□□ 0.16
SQSTM1-210ENST00000506042 MSGN1A6NI15 193 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 CD37P11049 281 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 UBE2KP61086 200 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 INSL4Q14641 139 aa16.02■□□□□ 0.16
SQSTM1-210ENST00000506042 ADAMTSL5Q6ZMM2 481 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms