RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 PET100P0DJ07 73 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD24P25063 80 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 PEBP1P30086 187 aaKnown RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 HSPA9P38646 679 aaKnown RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD79BP40259 229 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 XCL1P47992 114 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 EMP1P54849 157 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TAS2R30P59541 319 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 HOXC5Q00444 222 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMED1Q13445 227 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 EBPQ15125 230 aaKnown RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 LCN8Q6JVE9 175 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 Q6ZTI0 123 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 C2orf91Q6ZV80 131 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP5L2Q7Z4Y8 100 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC35E3Q7Z769 313 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 LHFPL1Q86WI0 220 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 CNEP1R1Q8N9A8 125 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 LFNGQ8NES3 379 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR11H2Q8NH07 326 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 C10orf105Q8TEF2 133 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 RNF133Q8WVZ7 376 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 FGF13Q92913 245 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMIGD2Q96BF3 282 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 MS4A6EQ96DS6 147 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 CPNE2Q96FN4 548 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC35G5Q96KT7 338 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 NAA38Q9BRA0 125 aaKnown RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM222Q9H0R3 208 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR51B6Q9H340 312 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPANXB1Q9NS25 103 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 NRBP2Q9NSY0 501 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 PARVAQ9NVD7 372 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 EMC3Q9P0I2 261 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 DOK5Q9P104 306 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 PRO2289Q9P1D8 64 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 FAM215AQ9Y5M1 114 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 RIMS2Q9UQ26 1411 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 GRIN2BQ13224 1484 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 DLG5Q8TDM6 1919 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 MYOFQ9NZM1 2061 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 FREM1Q5H8C1 2179 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 BRWD1Q9NSI6 2320 aa0.52□□□□□ -2.33
HMGB1P29-201ENST00000505659 TRGV5A0A0B4J1U4 118 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TRAV41A0A0B4J266 112 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A1W2PQD3 144 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TRPC5OSA6NMA1 111 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 IQCF5A8MTL0 148 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 FTCDNL1E5RQL4 147 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 F8W036 122 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 BHLHE40O14503 412 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TXNDC9O14530 226 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 MRASO14807 208 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 SCN2BO60939 215 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 ATP6V1G2O95670 118 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 MT-CO2P00403 227 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 ORM1P02763 201 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 OCMP0CE72 109 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF728P0DKX0 622 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 CCL3P10147 92 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 CRYBB3P26998 211 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR10J1P30954 320 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 MAGEA12P43365 314 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPL27AP46776 148 aaKnown RBP0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 GABRA2P47869 451 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 SERPINB10P48595 397 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 RPL14P50914 215 aaKnown RBP0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM33P57088 247 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 LINC00313P59037 77 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 SNAP25P60880 206 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM258P61165 79 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 AP1S1P61966 158 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 HERVK_113P63121 156 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 GLO1Q04760 184 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 SMAGPQ0VAQ4 97 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 HLA-DRB5Q30154 266 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM31Q5JXX7 168 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 SPATA31B1PQ5VZV4 182 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 XKRXQ6PP77 449 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 BAP18Q8IXM2 172 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 INTS1Q8N201 2190 aaKnown RBP0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR8B12Q8NGG6 310 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 OR5L1Q8NGL2 311 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 Q8WTZ3 238 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 C12orf43Q96C57 262 aaKnown RBP0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 DCUN1D5Q9BTE7 237 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 TIMM21Q9BVV7 248 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 GNB1LQ9BYB4 327 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 MROQ9BYG7 248 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 ZNF532Q9HCE3 1301 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 C8orf4Q9NR00 106 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 SLC2A9Q9NRM0 540 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 CD300AQ9UGN4 299 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 CFAP45Q9UL16 551 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 HHLA3Q9XRX5 114 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 HDGFL3Q9Y3E1 203 aa0.51□□□□□ -2.33
HMGB1P29-201ENST00000505659 HEATR5AQ86XA9 2040 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 NUP160Q12769 1436 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 A0A1W2PP64 1363 aa0.5□□□□□ -2.33
HMGB1P29-201ENST00000505659 TMEM94Q12767 1356 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms