RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 SIGLECL1Q8N7X8 197 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 SGMS2Q8NHU3 365 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 EMC6Q9BV81 110 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 MRPL27Q9P0M9 148 aaKnown RBP11.29□□□□□ -0.6
LETM1-203ENST00000505551 F2Z2F3 143 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 LGALS7P47929 136 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 ARF6P62330 175 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 C17orf82Q86X59 251 aaPredicted RBP11.29□□□□□ -0.6
LETM1-203ENST00000505551 OR5D13Q8NGL4 314 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 OR5P3Q8WZ94 311 aa11.29□□□□□ -0.6
LETM1-203ENST00000505551 RTTNQ86VV8 2226 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 C1QTNF9BB2RNN3 333 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 SH2D1BO14796 132 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 SIVA1O15304 175 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 GDF9O60383 454 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 GRB2P62993 217 aaKnown RBP11.28□□□□□ -0.6
LETM1-203ENST00000505551 Q6ZSR3 168 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 BAGE3Q86Y29 109 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 BAGE2Q86Y30 109 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 OR5B3Q8NH48 314 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 OR6C1Q96RD1 312 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 FGF21Q9NSA1 209 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 TNFRSF18Q9Y5U5 241 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 IGLC7A0M8Q6 106 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 C2orf72A6NCS6 295 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 OR5B21A6NL26 309 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 RNF212BA8MTL3 300 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 H0Y8G0 127 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 TLE3Q04726 772 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 WDR5BQ86VZ2 330 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 ZIC4Q8N9L1 334 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
LETM1-203ENST00000505551 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 MRPL18Q9H0U6 180 aaKnown RBP11.28□□□□□ -0.6
LETM1-203ENST00000505551 SLC7A10Q9NS82 523 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 MED12Q93074 2177 aa11.28□□□□□ -0.6
LETM1-203ENST00000505551 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 DUX1O43812 170 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 ANGPTL7O43827 346 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 ZNF253O75346 499 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 IGHG1P01857 330 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 PSG1P11464 419 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 SLC25A6P12236 298 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 CBLN1P23435 193 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 IL12BP29460 328 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 CDAP32320 146 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 SPIN3Q5JUX0 258 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 GUSBP11Q6P575 273 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 PLXDC1Q8IUK5 500 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 PNKDQ8N490 385 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 SLC25A22Q9H936 323 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 CLN8Q9UBY8 286 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 PSG11Q9UQ72 335 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 BDP1A6H8Y1 2624 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 A0A1W2PRS3 328 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 C9orf172C9J069 976 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 TGFAP01135 160 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 C1QTNF9P0C862 333 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 HBG1P69891 147 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 HBG2P69892 147 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 GAPTQ8N292 157 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 MAFAQ8NHW3 353 aaPredicted RBP11.27□□□□□ -0.61
LETM1-203ENST00000505551 OR4C12Q96R67 309 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 NRN1Q9NPD7 142 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 PIGLQ9Y2B2 252 aa11.27□□□□□ -0.61
LETM1-203ENST00000505551 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 PAGE4O60829 102 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 SERPINA7P05543 415 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 MFAP5Q13361 173 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 LPAL2Q16609 132 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 ACSM6Q6P461 480 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 SPSB1Q96BD6 273 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 SFRP2Q96HF1 295 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 GPHA2Q96T91 129 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 CEP192Q8TEP8 1941 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 SAA2-SAA4A0A096LPE2 208 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 H0Y980 276 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
LETM1-203ENST00000505551 CFIP05156 583 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
LETM1-203ENST00000505551 PLA2G5P39877 138 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 TMEM249Q2WGJ8 235 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 C10orf35Q96D05 121 aa11.26□□□□□ -0.61
LETM1-203ENST00000505551 LOC102725191A0A1B0GVB3 256 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 H3BMH7 237 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 GNG7O60262 68 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 RAMP3O60896 148 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 RAB9AP51151 201 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 DUSP3P51452 185 aaPredicted RBP11.25□□□□□ -0.61
LETM1-203ENST00000505551 TMEM211Q6ICI0 200 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 DEFB123Q8N688 67 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
LETM1-203ENST00000505551 FAM103A1Q9BTL3 118 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms