RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PIGBOS1A0A0B4J2F0 54 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 GCGP01275 180 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 SERPINA7P05543 415 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 PLP2Q04941 152 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 USF2Q15853 346 aaPredicted RBP9.96□□□□□ -0.81
UBE3D-206ENST00000505226 TEX38Q6PEX7 206 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 TMPRSS7Q7RTY8 843 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 TMEM256Q8N2U0 113 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 THOC3Q96J01 351 aaKnown RBP9.96□□□□□ -0.81
UBE3D-206ENST00000505226 SIT1Q9Y3P8 196 aa9.96□□□□□ -0.81
UBE3D-206ENST00000505226 URB1O60287 2271 aaKnown RBP9.96□□□□□ -0.81
UBE3D-206ENST00000505226 MLNRO43193 412 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 TYMSP04818 313 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 IL3RAP26951 378 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 MPLP40238 635 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 RPL15P61313 204 aaKnown RBP9.96□□□□□ -0.82
UBE3D-206ENST00000505226 GNB1P62873 340 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 MDP1Q86V88 176 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 TDHQ8IZJ6 230 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 TMEM105Q8N8V8 129 aa9.96□□□□□ -0.82
UBE3D-206ENST00000505226 BOKQ9UMX3 212 aaPredicted RBP9.96□□□□□ -0.82
UBE3D-206ENST00000505226 C11orf94C9JXX5 98 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 OR3A1P47881 315 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 ATP5G3P48201 142 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 TRA2AQ13595 282 aaKnown RBP eCLIP9.95□□□□□ -0.82
UBE3D-206ENST00000505226 FAM78BQ5VT40 261 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 Q6ZR03 302 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 MOB1BQ7L9L4 216 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF645Q8N7E2 425 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 NEIL1Q96FI4 390 aaPredicted RBP9.95□□□□□ -0.82
UBE3D-206ENST00000505226 NEU1Q99519 415 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 WASF3Q9UPY6 502 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 TRAV38-1A0A0B4J264 116 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 C12orf77C9JDV5 145 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 C1QTNF9P0C862 333 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 UBE2G2P60604 165 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 PAX5Q02548 391 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 SLC10A1Q14973 349 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF124Q15973 351 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 GBGT1Q8N5D6 347 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 MED13Q9UHV7 2174 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF146Q15072 292 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 BEND2Q8NDZ0 799 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 OR10P1Q8NGE3 313 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 TTTY12Q9BZ98 90 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 OR2J1Q9GZK6 312 aa9.95□□□□□ -0.82
UBE3D-206ENST00000505226 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 LINC00473A8K010 186 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 WNT9BO14905 357 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 SYNGR4O95473 234 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 CD33P20138 364 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 COX5AP20674 150 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 VWC2Q2TAL6 325 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 MRPL41Q8IXM3 137 aaKnown RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 CISD2Q8N5K1 135 aaKnown RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 FAM173AQ9BQD7 235 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 SNHG12Q9BXW3 62 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 PRR14LQ5THK1 2151 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 NXPH2O95156 264 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 NDUFB4O95168 129 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 GCH1P30793 250 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 SRP14P37108 136 aaKnown RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 AESQ08117 197 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 SSPNQ14714 243 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 TCF23Q7RTU1 214 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 TMEM144Q7Z5S9 345 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 TMEM251Q8N6I4 163 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 IGHEP01854 428 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 GRPP07492 148 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 CNN1P51911 297 aaKnown RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 ATP6V1FQ16864 119 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 LBHQ53QV2 105 aaPredicted RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF826PQ6ZT77 177 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 CXorf67Q86X51 503 aaPredicted RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 BCL2L2Q92843 193 aaPredicted RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 TMEM18Q96B42 140 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 LURAP1Q96LR2 239 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 TMEM204Q9BSN7 226 aa9.94□□□□□ -0.82
UBE3D-206ENST00000505226 MRPL37Q9BZE1 423 aaKnown RBP9.94□□□□□ -0.82
UBE3D-206ENST00000505226 CFAP47Q6ZTR5 3102 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 C15orf62A8K5M9 175 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 VENTXO95231 258 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 MBP02144 154 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 CD82P27701 267 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 SPCS3P61009 180 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 NUTF2P61970 127 aaKnown RBP9.93□□□□□ -0.82
UBE3D-206ENST00000505226 ZNF766Q5HY98 468 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 RTL8AQ9BWD3 113 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 CBLN4Q9NTU7 201 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 LOXL2Q9Y4K0 774 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 TCAPO15273 167 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 HBZP02008 142 aa9.93□□□□□ -0.82
UBE3D-206ENST00000505226 COL27A1Q8IZC6 1860 aaPredicted RBP9.93□□□□□ -0.82
UBE3D-206ENST00000505226 TPRX1Q8N7U7 411 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms