RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CXorf66Q5JRM2 361 aaPredicted RBP6.19□□□□□ -1.42
SKP2-203ENST00000504386 ZNF660Q6AZW8 331 aaPredicted RBP6.19□□□□□ -1.42
SKP2-203ENST00000504386 LPCAT3Q6P1A2 487 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 TREML4Q6UXN2 200 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 ZNF66Q6ZN08 573 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 Q6ZPA2 131 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 TMEM17Q86X19 198 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 CMTM1Q8IZ96 169 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 STPG2Q8N412 459 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 POC5Q8NA72 575 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 OR5H2Q8NGV7 314 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 VSTM2AQ8TAG5 236 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 OSR1Q8TAX0 266 aaPredicted RBP6.19□□□□□ -1.42
SKP2-203ENST00000504386 CD300LFQ8TDQ1 290 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 MAFIPQ8WZ33 124 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 TMEM68Q96MH6 324 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 GPR61Q9BZJ8 451 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 SIGLEC9Q9Y336 463 aa6.19□□□□□ -1.42
SKP2-203ENST00000504386 TCRBV4S1A1TA0A5B7 111 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 ZNF701M0R085 212 aaPredicted RBP6.18□□□□□ -1.42
SKP2-203ENST00000504386 SSX5O60225 188 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 TUSC2O75896 110 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 ACTL6BO94805 426 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 AMY1AP04745 511 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 AMY2AP04746 511 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 IGF1P05019 195 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 PF4V1P10720 104 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 CD83Q01151 205 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 SSBP1Q04837 148 aaKnown RBP6.18□□□□□ -1.42
SKP2-203ENST00000504386 FOXE3Q13461 319 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 KHDC1LQ5JSQ8 128 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 PYHIN1Q6K0P9 492 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 FAM53AQ6NSI3 398 aaPredicted RBP6.18□□□□□ -1.42
SKP2-203ENST00000504386 TMEM65Q6PI78 240 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 KCTD9Q7L273 389 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 OR6F1Q8NGZ6 308 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 OR4S2Q8NH73 311 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 GIMAP1Q8WWP7 306 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 TAF15Q92804 592 aaKnown RBP eCLIP6.18□□□□□ -1.42
SKP2-203ENST00000504386 HARBI1Q96MB7 349 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 OR51J1Q9H342 316 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 PLSCR3Q9NRY6 295 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 SDHAF2Q9NX18 166 aa6.18□□□□□ -1.42
SKP2-203ENST00000504386 RBMX2Q9Y388 322 aaKnown RBP6.18□□□□□ -1.42
SKP2-203ENST00000504386 CCDC160A6NGH7 325 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 ZNF736B4DX44 427 aaPredicted RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 SHOXO15266 292 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 RBFOX2O43251 390 aaKnown RBP eCLIP6.17□□□□□ -1.42
SKP2-203ENST00000504386 HPGDSO60760 199 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 DUS4LO95620 317 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 HRASP01112 189 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 PPYP01298 95 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 PF4P02776 101 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 IFNA6P05013 189 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 EIF4EP06730 217 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 NAT1P18440 290 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 NFYAP23511 347 aaPredicted RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 FCGR2CP31995 323 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 DUTP33316 252 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 S100A5P33763 92 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 TGFBR1P36897 503 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 TSPAN5P62079 268 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 DYRK1AQ13627 763 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 TMEM177Q53S58 311 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 ZNF562Q6V9R5 426 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 OVCH2Q7RTZ1 564 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 TEX45Q8NA69 505 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 GPX8Q8TED1 209 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 WIPF2Q8TF74 440 aaPredicted RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 ABHD5Q8WTS1 349 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 FCAMRQ8WWV6 532 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 ISOC1Q96CN7 298 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 PARP12Q9H0J9 701 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 TAS2R8Q9NYW2 309 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 EHFQ9NZC4 300 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 NDUFA13Q9P0J0 144 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 METTL1Q9UBP6 276 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 EXTL2Q9UBQ6 330 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 ZMAT5Q9UDW3 170 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 RSL24D1Q9UHA3 163 aaKnown RBP6.17□□□□□ -1.42
SKP2-203ENST00000504386 ANAPC10Q9UM13 185 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 A3GALT2U3KPV4 340 aa6.17□□□□□ -1.42
SKP2-203ENST00000504386 TRAV41A0A0B4J266 112 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 NUDT19A8MXV4 375 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 ARPC1BO15143 372 aaKnown RBP6.16□□□□□ -1.42
SKP2-203ENST00000504386 CNIH1O95406 144 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 IGHG4P01861 327 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 CD28P10747 220 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 ELK1P19419 428 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 ECI1P42126 302 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 CRIP2P52943 208 aaPredicted RBP6.16□□□□□ -1.42
SKP2-203ENST00000504386 F2RL1P55085 397 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 PSG5Q15238 335 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 NSUN5P1Q3KNT7 163 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 TMEM95Q3KNT9 176 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 RNASE10Q5GAN6 216 aaKnown RBP6.16□□□□□ -1.42
SKP2-203ENST00000504386 DHRS11Q6UWP2 260 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 GLDNQ6ZMI3 551 aaPredicted RBP6.16□□□□□ -1.42
SKP2-203ENST00000504386 PPP1R27Q86WC6 154 aa6.16□□□□□ -1.42
SKP2-203ENST00000504386 SNX29P2Q8IUI4 249 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms