RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 OR5D14Q8NGL3 314 aa9.05□□□□□ -0.96
LSM6-204ENST00000504181 PELI1Q96FA3 418 aa9.05□□□□□ -0.96
LSM6-204ENST00000504181 CPNE2Q96FN4 548 aaPredicted RBP9.05□□□□□ -0.96
LSM6-204ENST00000504181 ATP6V1G3Q96LB4 118 aa9.05□□□□□ -0.96
LSM6-204ENST00000504181 METTL9Q9H1A3 318 aa9.05□□□□□ -0.96
LSM6-204ENST00000504181 ZNF556Q9HAH1 456 aa9.05□□□□□ -0.96
LSM6-204ENST00000504181 RPL36Q9Y3U8 105 aaKnown RBP9.05□□□□□ -0.96
LSM6-204ENST00000504181 S4R3C0 116 aa9.05□□□□□ -0.96
LSM6-204ENST00000504181 TSPAN4O14817 238 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 FAM209BQ5JX69 171 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 LY6G6FQ5SQ64 297 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 AADACL4Q5VUY2 407 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 CLEC19AQ6UXS0 136 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 UNQ9165/PRO28630Q6UXU0 137 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 ZNF367Q7RTV3 350 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 HS3ST5Q8IZT8 346 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 GAPTQ8N292 157 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 NECAP1Q8NC96 275 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 SETD9Q8NE22 299 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 OR51A2Q8NGJ7 313 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 ASB9Q96DX5 294 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 FGFR1OP2Q9NVK5 253 aa9.04□□□□□ -0.96
LSM6-204ENST00000504181 FAM90A7PA6NKC0 464 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 CRYGBP07316 175 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 HTR1AP08908 422 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 ZNF85Q03923 595 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 TNXAQ16473 311 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 RAB12Q6IQ22 244 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 FRZBQ92765 325 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 MARC2Q969Z3 335 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 GALMQ96C23 342 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 MAGIXQ9H6Y5 334 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 IL36GQ9NZH8 169 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 MRPL27Q9P0M9 148 aaKnown RBP9.03□□□□□ -0.96
LSM6-204ENST00000504181 STEAP1Q9UHE8 339 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 CELA1Q9UNI1 258 aa9.03□□□□□ -0.96
LSM6-204ENST00000504181 ELOA3CA0A087WX78 387 aaPredicted RBP9.02□□□□□ -0.97
LSM6-204ENST00000504181 UBE2QL1A1L167 161 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 OR4C46A6NHA9 309 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 APOA2P02652 100 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 RAB3AP20336 220 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 PRKACGP22612 351 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 GK3PQ14409 553 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 PDPNQ86YL7 162 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 ZNF383Q8NA42 475 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 IL1F10Q8WWZ1 152 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 SRSF12Q8WXF0 261 aaKnown RBP9.02□□□□□ -0.97
LSM6-204ENST00000504181 NSL1Q96IY1 281 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 S100A13Q99584 98 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 PEX16Q9Y5Y5 336 aa9.02□□□□□ -0.97
LSM6-204ENST00000504181 TCRBV5S2A0A599 114 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 CST1P01037 141 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 CRISP1P54107 249 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 C12orf74Q32Q52 190 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 SLC22A6Q4U2R8 563 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 C19orf35Q6ZS72 473 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 GID4Q8IVV7 300 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 LYPD1Q8N2G4 141 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 PARP16Q8N5Y8 322 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 TMEM163Q8TC26 289 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 MRPL30Q8TCC3 161 aaKnown RBP9.01□□□□□ -0.97
LSM6-204ENST00000504181 IL4I1Q96RQ9 567 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 SPACA1Q9HBV2 294 aa9.01□□□□□ -0.97
LSM6-204ENST00000504181 OR4C45A6NMZ5 311 aa9□□□□□ -0.97
LSM6-204ENST00000504181 PROP1O75360 226 aa9□□□□□ -0.97
LSM6-204ENST00000504181 CCR9P51686 369 aa9□□□□□ -0.97
LSM6-204ENST00000504181 KRTAP10-2P60368 255 aa9□□□□□ -0.97
LSM6-204ENST00000504181 PTGES3Q15185 160 aaKnown RBP9□□□□□ -0.97
LSM6-204ENST00000504181 FAM98BQ52LJ0 330 aaKnown RBP9□□□□□ -0.97
LSM6-204ENST00000504181 LAMTOR1Q6IAA8 161 aa9□□□□□ -0.97
LSM6-204ENST00000504181 FDX2Q6P4F2 183 aa9□□□□□ -0.97
LSM6-204ENST00000504181 ZNF554Q86TJ5 538 aa9□□□□□ -0.97
LSM6-204ENST00000504181 C6orf223Q8N319 242 aa9□□□□□ -0.97
LSM6-204ENST00000504181 ACOT12Q8WYK0 555 aa9□□□□□ -0.97
LSM6-204ENST00000504181 HARBI1Q96MB7 349 aa9□□□□□ -0.97
LSM6-204ENST00000504181 PRRG3Q9BZD7 231 aa9□□□□□ -0.97
LSM6-204ENST00000504181 SLC35D1Q9NTN3 355 aa9□□□□□ -0.97
LSM6-204ENST00000504181 WARS2Q9UGM6 360 aaKnown RBP9□□□□□ -0.97
LSM6-204ENST00000504181 IGHV3-35A0A0C4DH35 117 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 CA11O75493 328 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 GPX5O75715 221 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 SC5DO75845 299 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 GTF2F2P13984 249 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
LSM6-204ENST00000504181 ATP6V1E1P36543 226 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 CMTM5Q96DZ9 223 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 PAK1IP1Q9NWT1 392 aaPredicted RBP8.99□□□□□ -0.97
LSM6-204ENST00000504181 TAS2R4Q9NYW5 299 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 MDFICQ9P1T7 246 aa8.99□□□□□ -0.97
LSM6-204ENST00000504181 GNGT2O14610 69 aa8.98□□□□□ -0.97
LSM6-204ENST00000504181 CCDC22O60826 627 aa8.98□□□□□ -0.97
LSM6-204ENST00000504181 BAG2O95816 211 aa8.98□□□□□ -0.97
LSM6-204ENST00000504181 CTSDP07339 412 aaPredicted RBP8.98□□□□□ -0.97
LSM6-204ENST00000504181 ANXA8P13928 327 aa8.98□□□□□ -0.97
LSM6-204ENST00000504181 MIFP14174 115 aa8.98□□□□□ -0.97
LSM6-204ENST00000504181 EFNB1P98172 346 aa8.98□□□□□ -0.97
LSM6-204ENST00000504181 HMGN3Q15651 99 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms