RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
PDGFC-203ENST00000502773 RALYQ9UKM9 306 aaKnown RBP6.28□□□□□ -1.4
PDGFC-203ENST00000502773 SPAARA0A1B0GVQ0 90 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 MEX3AA1L020 520 aaKnown RBP6.28□□□□□ -1.4
PDGFC-203ENST00000502773 MPDU1O75352 247 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 ERVK11-1P61568 191 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 ADIRFQ15847 76 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 GCNT2Q8N0V5 402 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 CEP350Q5VT06 3117 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 TRGV10A0A0A0MS01 117 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 TM4SF5O14894 197 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
PDGFC-203ENST00000502773 CLDN1O95832 211 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 HOXA5P20719 270 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 IL3RAP26951 378 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 WDR73Q6P4I2 378 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 VASH2Q86V25 355 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 OR4A16Q8NH70 328 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 S1PR3Q99500 378 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 NEU1Q99519 415 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
PDGFC-203ENST00000502773 C5orf63A6NC05 138 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 SLC33A1O00400 549 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF207O43670 478 aaKnown RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 MUC1P15941 1255 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 EPHA1P21709 976 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 Q6P435 159 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 BTNL8Q6UX41 500 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 ACP7Q6ZNF0 438 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF818PQ6ZRF7 136 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 Q6ZS92 163 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 LRRC29Q8WV35 223 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 RNF7Q9UBF6 113 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 TRAV24A0A0B4J272 114 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 MED19A0JLT2 244 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 HSPB6O14558 160 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 CHST1O43916 411 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 CLDN14O95500 239 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 HRASP01112 189 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 IGLV1-44P01699 117 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 SOD3P08294 240 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 LPAR6P43657 344 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 PSG7Q13046 419 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF154Q13106 437 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 C3AR1Q16581 482 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 MRGPRGQ86SM5 289 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 OR5C1Q8NGR4 320 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 FAM57AQ8TBR7 257 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 P2RX4Q99571 388 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 PITPNC1Q9UKF7 332 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 LIPGQ9Y5X9 500 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 IGKV1D-8A0A087WSZ0 117 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 CEBPZOSA8MTT3 80 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 HPRT1P00492 218 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 PRDX2P32119 198 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 KIR2DL2P43627 348 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 FHITP49789 147 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 CRIP3Q6Q6R5 217 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 CXorf67Q86X51 503 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 NEIL1Q96FI4 390 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 RCC1LQ96I51 464 aaKnown RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF71Q9NQZ8 489 aaPredicted RBP6.27□□□□□ -1.41
PDGFC-203ENST00000502773 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
PDGFC-203ENST00000502773 PCNX3Q9H6A9 2034 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 M0R1B8 84 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 IGHV3-13P01766 116 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 THBS3P49746 956 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 ERVFC1-1P60608 527 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 ACOT6Q3I5F7 207 aaPredicted RBP6.26□□□□□ -1.41
PDGFC-203ENST00000502773 NMSQ5H8A3 153 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 KLHDC1Q8N7A1 406 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 ACTR3CQ9C0K3 210 aaPredicted RBP6.26□□□□□ -1.41
PDGFC-203ENST00000502773 MEGF9Q9H1U4 602 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 HES4Q9HCC6 221 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 TRAV1-1A0A0B4J248 108 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 hADV38S2A0JD32 116 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 ZNF727A8MUV8 499 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 HSPB1P04792 205 aaKnown RBP6.26□□□□□ -1.41
PDGFC-203ENST00000502773 FAM157CP0CG43 387 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 TESK1Q15569 626 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 BRICD5Q6PL45 260 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 PRR18Q8N4B5 295 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 OR4S2Q8NH73 311 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 WFIKKN1Q96NZ8 548 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 SLC35D1Q9NTN3 355 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 CACNG5Q9UF02 275 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 TRAV38-1A0A0B4J264 116 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 IGHV2OR16-5A0A0B4J2B6 119 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 FAM24AA6NFZ4 105 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 KLK10O43240 276 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 OR10J1P30954 320 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 SMAGPQ0VAQ4 97 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 RTL8BQ17RB0 113 aa6.26□□□□□ -1.41
PDGFC-203ENST00000502773 DMRTC1Q5HYR2 192 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms