RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 PXMP4Q9Y6I8 212 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 EFEMP2O95967 443 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 CT83Q5H943 113 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 PLD4Q96BZ4 506 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 RPRMQ9NS64 109 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 HOXC6P09630 235 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 ABCC1P33527 1531 aa4.14□□□□□ -1.75
NEAT1-202ENST00000501122 GALR2O43603 387 aaPredicted RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 BCORP1Q8N888 145 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 WNT2P09544 360 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 WIPI1Q5MNZ9 446 aaPredicted RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 ARIH2OSQ8N7S6 290 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 IGHV3-64DA0A0J9YX35 117 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 IGLON5A6NGN9 336 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 PPIHO43447 177 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 DNAJB12Q9NXW2 375 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 IZUMO1RA6ND01 250 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 PDLIM4P50479 330 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 RPS4XP62701 263 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 FOXC2Q99958 501 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 RPL30P62888 115 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 BMPERQ8N8U9 685 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 GLIPR2Q9H4G4 154 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TRAV12-3A0A0B4J271 114 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TRAV21A0A0B4J279 112 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 CA6P23280 308 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 VGLL4Q14135 290 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 SRD5A2P31213 254 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 FAM159AQ6UWV7 190 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 FGF13Q92913 245 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 GNB4Q9HAV0 340 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 UPK2O00526 184 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 DAZLQ92904 295 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 KLHDC2Q9Y2U9 406 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 R4GN57 208 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TRAV13-1A0A0B4J241 112 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 H3BTX0 84 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 LGALS2P05162 132 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 IGLC1P0CG04 106 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TAF15Q92804 592 aaKnown RBP eCLIP4.13□□□□□ -1.753e-47■□□□□ 10.8
NEAT1-202ENST00000501122 CEACAM6P40199 344 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 LGALS7P47929 136 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 IGFBP7Q16270 282 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 RNF166Q96A37 237 aaPredicted RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 RETNQ9HD89 108 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 RPL23P62829 140 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 CD200R1LQ6Q8B3 271 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 MYOFQ9NZM1 2061 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TRAV1-1A0A0B4J248 108 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 ADMP35318 185 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 ZDHHC23Q8IYP9 409 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 GPR146Q96CH1 333 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 HMGN4O00479 90 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 NPWQ8N729 165 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 A0A1B0GTH9 108 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 APOBEC4Q8WW27 367 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 NDUFA3O95167 84 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 LGALS1P09382 135 aaKnown RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 MOB3BQ86TA1 216 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 PRADC1Q9BSG0 188 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 LMTK3Q96Q04 1460 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 PROB1E7EW31 1015 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 DRD3P35462 400 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 Q6ZVL8 140 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 C15orf53Q8NAA6 179 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 HS3ST3B1Q9Y662 390 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 IGKV6D-41A0A0C4DH26 115 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 FOXA3P55318 350 aaPredicted RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TEX43Q6ZNM6 134 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 TAAR2Q9P1P5 351 aa4.13□□□□□ -1.75
NEAT1-202ENST00000501122 COA3Q9Y2R0 106 aaPredicted RBP4.13□□□□□ -1.75
NEAT1-202ENST00000501122 RPL11P62913 178 aaKnown RBP4.12□□□□□ -1.75
NEAT1-202ENST00000501122 COLCA1Q6ZS62 124 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 WFDC2Q14508 124 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 MORN2Q502X0 79 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 C10orf91Q5T1B1 145 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 VKORC1L1Q8N0U8 176 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 LYRM4Q9HD34 91 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 TNFRSF18Q9Y5U5 241 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 CC2D2AQ9P2K1 1620 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 RNF222A6NCQ9 220 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 LIM2P55344 173 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 CX3CL1P78423 397 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 DLX6P56179 175 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
NEAT1-202ENST00000501122 DEFB125Q8N687 156 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 SSMEM1Q8WWF3 244 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 PSMB5P28074 263 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 KLRD1Q13241 179 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 IL17FQ96PD4 163 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 NGFRP08138 427 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 ORM2P19652 201 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 CDPF1Q6NVV7 123 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 Q6ZWC4 215 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 STARD5Q9NSY2 213 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 FXYD3Q14802 87 aa4.12□□□□□ -1.75
NEAT1-202ENST00000501122 A0A0D9SEW6 157 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms