RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 AP4S1Q9Y587 144 aa11.63□□□□□ -0.55
HDAC6-236ENST00000498808 SAC3D1A6NKF1 404 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 SPRY2O43597 315 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 PRH1P02810 166 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 CAPGP40121 348 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 RHOGP84095 191 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 ZNF45Q02386 682 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 MRGPRG-AS1Q2M3A8 158 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 DEFB135Q30KP9 77 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 ZNF880Q6PDB4 577 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 OR52B4Q8NGK2 314 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 FAM46BQ96A09 425 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 SLC7A6OSQ96CW6 309 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-236ENST00000498808 DMRT1Q9Y5R6 373 aa11.62□□□□□ -0.55
HDAC6-236ENST00000498808 DNAH11Q96DT5 4516 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.61□□□□□ -0.55
HDAC6-236ENST00000498808 FAM223BA6NKX1 122 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 NAPSAO96009 420 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 HLA-AP01891 365 aaKnown RBP11.61□□□□□ -0.55
HDAC6-236ENST00000498808 APOA2P02652 100 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 OR9G9P0C7N8 305 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 Q6ZWC4 215 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 FAM223AQ8IWN6 122 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 CCDC197Q8NCU1 140 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 SMIM19Q96E16 107 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 FAAP24Q9BTP7 215 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 CKLFQ9UBR5 152 aa11.61□□□□□ -0.55
HDAC6-236ENST00000498808 TRBV9A0A0B4J1U6 114 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 PPP5D1E7EU14 171 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 OGG1O15527 345 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 ALPLP05186 524 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 FCGR1AP12314 374 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 CBLN1P23435 193 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 CEACAM6P40199 344 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 RPS11P62280 158 aaKnown RBP eCLIP11.6□□□□□ -0.55
HDAC6-236ENST00000498808 ATP5G2Q06055 141 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 ZIK1Q3SY52 487 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-236ENST00000498808 TM4SF20Q53R12 229 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 OR2G6Q5TZ20 316 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 C6orf201Q7Z4U5 140 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 EDARADDQ8WWZ3 215 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 CENPNQ96H22 339 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-236ENST00000498808 PHB2Q99623 299 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 SLC35D1Q9NTN3 355 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 MLXQ9UH92 298 aa11.6□□□□□ -0.55
HDAC6-236ENST00000498808 A0A1B0GVY2 172 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 A0A1W2PPK0 400 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 SRRM4A7MD48 611 aaKnown RBP11.59□□□□□ -0.55
HDAC6-236ENST00000498808 LGALS9O00182 355 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 TUSC2O75896 110 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 SCAF4O95104 1147 aaKnown RBP11.59□□□□□ -0.55
HDAC6-236ENST00000498808 OR2C1O95371 312 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 LALBAP00709 142 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 Q499Y3 187 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 ZNF57Q68EA5 555 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-236ENST00000498808 CDH26Q8IXH8 852 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 SETD6Q8TBK2 473 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 THRSPQ92748 146 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 PTX4Q96A99 478 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 HARBI1Q96MB7 349 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 NEDD4LQ96PU5 975 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 MRPS18AQ9NVS2 196 aaKnown RBP11.59□□□□□ -0.55
HDAC6-236ENST00000498808 DNAH17Q9UFH2 4485 aa11.59□□□□□ -0.55
HDAC6-236ENST00000498808 TRBV5-7A0A0A0MS05 114 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 TMEM213A2RRL7 107 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 M0R1X1 148 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 ETV1P50549 477 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 TMEM217Q8N7C4 229 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 RHOXF1Q8NHV9 184 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 RNF183Q96D59 192 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 CHMP1AQ9HD42 196 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-236ENST00000498808 ZNF221Q9UK13 617 aa11.58□□□□□ -0.56
HDAC6-236ENST00000498808 EI24O14681 340 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 GGCTO75223 188 aaKnown RBP11.57□□□□□ -0.56
HDAC6-236ENST00000498808 ZBTB25P24278 435 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 APOC4P55056 127 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 TNXAQ16473 311 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 OR10K2Q6IF99 312 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 MOB1BQ7L9L4 216 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 SRSF12Q8WXF0 261 aaKnown RBP11.57□□□□□ -0.56
HDAC6-236ENST00000498808 PGLYRP3Q96LB9 341 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
HDAC6-236ENST00000498808 MPPED1O15442 326 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 HTR2CP28335 458 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 HLA-DRB3P79483 266 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 C15orf32Q32M92 178 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 ANKRD55Q3KP44 614 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 TMEM177Q53S58 311 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 YIF1BQ5BJH7 314 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 UXS1Q8NBZ7 420 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 NECAP1Q8NC96 275 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 Q96MT0 163 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 HDHD3Q9BSH5 251 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-236ENST00000498808 FGF20Q9NP95 211 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-236ENST00000498808 BABAM2Q9NXR7 383 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 ORC6Q9Y5N6 252 aa11.56□□□□□ -0.56
HDAC6-236ENST00000498808 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 A8MWP6 167 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms