RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ZNF660Q6AZW8 331 aaPredicted RBP12.54□□□□□ -0.4
NR1H3-227ENST00000498548 MINDY2Q8NBR6 621 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 OR11H1Q8NG94 326 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 DPF1Q92782 380 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 MCRIP2Q9BUT9 160 aaKnown RBP12.54□□□□□ -0.4
NR1H3-227ENST00000498548 ST6GALNAC5Q9BVH7 336 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 SLC35D1Q9NTN3 355 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 RBM7Q9Y580 266 aaKnown RBP12.54□□□□□ -0.4
NR1H3-227ENST00000498548 NUBP2Q9Y5Y2 271 aa12.54□□□□□ -0.4
NR1H3-227ENST00000498548 LOC100506127A0A0U1RQW1 187 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 RBBP9O75884 186 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 CA2P00918 260 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 APOA2P02652 100 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 LUMP51884 338 aaPredicted RBP12.53□□□□□ -0.4
NR1H3-227ENST00000498548 GNB1P62873 340 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 C19orf54Q5BKX5 351 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 SFXN4Q6P4A7 337 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 TPRA1Q86W33 373 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 PPP1R27Q86WC6 154 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 LGALS14Q8TCE9 139 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 MYOZ3Q8TDC0 251 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 RNF5Q99942 180 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 GINS4Q9BRT9 223 aa12.53□□□□□ -0.4
NR1H3-227ENST00000498548 ALX4Q9H161 411 aaPredicted RBP12.53□□□□□ -0.4
NR1H3-227ENST00000498548 SLC25A17O43808 307 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 CD36P16671 472 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 UNQ5815/PRO19632Q6UWF5 114 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 BVESQ8NE79 360 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 LFNGQ8NES3 379 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 OR5M8Q8NGP6 311 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 OR5H6Q8NGV6 325 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 FLYWCH2Q96CP2 140 aaKnown RBP12.52□□□□□ -0.41
NR1H3-227ENST00000498548 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
NR1H3-227ENST00000498548 GPR61Q9BZJ8 451 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 VSIG4Q9Y279 399 aa12.52□□□□□ -0.41
NR1H3-227ENST00000498548 TMEM235A6NFC5 223 aa12.51□□□□□ -0.41
NR1H3-227ENST00000498548 I3L521 148 aa12.51□□□□□ -0.41
NR1H3-227ENST00000498548 ARPC1BO15143 372 aaKnown RBP12.51□□□□□ -0.41
NR1H3-227ENST00000498548 CRIP2P52943 208 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-227ENST00000498548 ZNF260Q3ZCT1 412 aa12.51□□□□□ -0.41
NR1H3-227ENST00000498548 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
NR1H3-227ENST00000498548 H1FOOQ8IZA3 346 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-227ENST00000498548 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-227ENST00000498548 CENPOQ9BU64 300 aa12.51□□□□□ -0.41
NR1H3-227ENST00000498548 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-227ENST00000498548 SEC14L6B5MCN3 397 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 IGLV2-23P01705 113 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 DTYMKP23919 212 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 TGFBR1P36897 503 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 TMEM267Q0VDI3 215 aaPredicted RBP12.5□□□□□ -0.41
NR1H3-227ENST00000498548 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 FHL3Q13643 280 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 FXYD3Q14802 87 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
NR1H3-227ENST00000498548 IDNKQ5T6J7 187 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 ZNF562Q6V9R5 426 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 Q6ZS49 121 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 GRPEL2Q8TAA5 225 aa12.5□□□□□ -0.41
NR1H3-227ENST00000498548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.5□□□□□ -0.41
NR1H3-227ENST00000498548 SRRM4A7MD48 611 aaKnown RBP12.49□□□□□ -0.41
NR1H3-227ENST00000498548 SSX5O60225 188 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 IGHV3-11P01762 117 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 NFYAP23511 347 aaPredicted RBP12.49□□□□□ -0.41
NR1H3-227ENST00000498548 GNG2P59768 71 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 DGCR2P98153 550 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 ARL6IP1Q15041 203 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 KCTD21Q4G0X4 260 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 ACTBL2Q562R1 376 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 C9orf66Q5T8R8 295 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 ARPC1AQ92747 370 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 RHBDL2Q9NX52 303 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
NR1H3-227ENST00000498548 DNAH9Q9NYC9 4486 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 LINC00473A8K010 186 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 SHOXO15266 292 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 SPDEFO95238 335 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 CNIH1O95406 144 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 CRYGBP07316 175 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 SLURP1P55000 103 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 SSBP2P81877 361 aaPredicted RBP12.48□□□□□ -0.41
NR1H3-227ENST00000498548 RUNX1Q01196 453 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 ZNF616Q08AN1 781 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 AKIRIN2Q53H80 203 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 OR5T1Q8NG75 326 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 SLC25A38Q96DW6 304 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 PRR25Q96S07 402 aa12.48□□□□□ -0.41
NR1H3-227ENST00000498548 TRAV18A0A075B6X5 111 aa12.47□□□□□ -0.41
NR1H3-227ENST00000498548 DIRAS3O95661 229 aa12.47□□□□□ -0.41
NR1H3-227ENST00000498548 FCER2P06734 321 aa12.47□□□□□ -0.41
NR1H3-227ENST00000498548 PTHLHP12272 177 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms